Literature DB >> 16060654

An arginine to lysine mutation in the vicinity of the heme propionates affects the redox potentials of the hemes and associated electron and proton transfer in cytochrome c oxidase.

Denise A Mills1, Lois Geren, Carrie Hiser, Bryan Schmidt, Bill Durham, Francis Millett, Shelagh Ferguson-Miller.   

Abstract

Cytochrome c oxidase pumps protons across a membrane using energy from electron transfer and reduction of oxygen to water. It is postulated that an element of the energy transduction mechanism is the movement of protons to the vicinity of the hemes upon reduction, to favor charge neutrality. Possible sites on which protons could reside, in addition to the conserved carboxylate E286, are the propionate groups of heme a and/or heme a(3). A highly conserved pair of arginines (R481 and R482) interact with these propionates through ionic and hydrogen bonds. This study shows that the conservative mutant, R481K, although as fully active as the wild type under many conditions, exhibits a significant decrease in the midpoint redox potential of heme a relative to Cu(A) (DeltaE(m)) of approximately equal 40 mV, has lowered activity under conditions of high pH or in the presence of a membrane potential, and has a slowed heme a(3) reduction with dithionite. Another mutant, D132A, which strongly inhibits proton uptake from the internal side of the membrane, has <4% of the activity of the wild type and appears to be dependent on proton uptake from the outside. A double mutation, D132A/R481K, is even more strongly inhibited ( approximately 1% of that of the wild type). The more-than-additive effect supports the concept that R481K not only lowers the midpoint potential of heme a but also limits a supply route for protons from the outside of the membrane used by the D132 mutant. The results are consistent with an important role of R481 and heme a/a(3) propionates in proton movement in a reversible exit path.

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Year:  2005        PMID: 16060654      PMCID: PMC2533729          DOI: 10.1021/bi050283d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  51 in total

1.  Functional properties of the heme propionates in cytochrome c oxidase from Paracoccus denitrificans. Evidence from FTIR difference spectroscopy and site-directed mutagenesis.

Authors:  J Behr; H Michel; W Mäntele; P Hellwig
Journal:  Biochemistry       Date:  2000-02-15       Impact factor: 3.162

2.  The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides.

Authors:  Margareta Svensson-Ek; Jeff Abramson; Gisela Larsson; Susanna Törnroth; Peter Brzezinski; So Iwata
Journal:  J Mol Biol       Date:  2002-08-09       Impact factor: 5.469

3.  Redox dependent changes at the heme propionates in cytochrome c oxidase from Paracoccus denitrificans: direct evidence from FTIR difference spectroscopy in combination with heme propionate 13C labeling.

Authors:  J Behr; P Hellwig; W Mäntele; H Michel
Journal:  Biochemistry       Date:  1998-05-19       Impact factor: 3.162

4.  Polar residues in helix VIII of subunit I of cytochrome c oxidase influence the activity and the structure of the active site.

Authors:  J P Hosler; J P Shapleigh; D M Mitchell; Y Kim; M A Pressler; C Georgiou; G T Babcock; J O Alben; S Ferguson-Miller; R B Gennis
Journal:  Biochemistry       Date:  1996-08-20       Impact factor: 3.162

5.  Slow proton transfer through the pathways for pumped protons in cytochrome c oxidase induces suicide inactivation of the enzyme.

Authors:  Denise A Mills; Jonathan P Hosler
Journal:  Biochemistry       Date:  2005-03-29       Impact factor: 3.162

Review 6.  The currents of life: the terminal electron-transfer complex of respiration.

Authors:  B E Ramirez; B G Malmström; J R Winkler; H B Gray
Journal:  Proc Natl Acad Sci U S A       Date:  1995-12-19       Impact factor: 11.205

7.  Independent control of respiration in cytochrome c oxidase vesicles by pH and electrical gradients.

Authors:  L Gregory; S Ferguson-Miller
Journal:  Biochemistry       Date:  1989-03-21       Impact factor: 3.162

8.  The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process.

Authors:  Tomitake Tsukihara; Kunitoshi Shimokata; Yukie Katayama; Hideo Shimada; Kazumasa Muramoto; Hiroshi Aoyama; Masao Mochizuki; Kyoko Shinzawa-Itoh; Eiki Yamashita; Min Yao; Yuzuru Ishimura; Shinya Yoshikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-12       Impact factor: 11.205

9.  Effects of arginine-82 on the interactions of internal water molecules in bacteriorhodopsin.

Authors:  M Hatanaka; J Sasaki; H Kandori; T G Ebrey; R Needleman; J K Lanyi; A Maeda
Journal:  Biochemistry       Date:  1996-05-21       Impact factor: 3.162

10.  The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.

Authors:  T Tsukihara; H Aoyama; E Yamashita; T Tomizaki; H Yamaguchi; K Shinzawa-Itoh; R Nakashima; R Yaono; S Yoshikawa
Journal:  Science       Date:  1996-05-24       Impact factor: 47.728

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  14 in total

Review 1.  Design of photoactive ruthenium complexes to study electron transfer and proton pumping in cytochrome oxidase.

Authors:  Bill Durham; Francis Millett
Journal:  Biochim Biophys Acta       Date:  2011-09-10

Review 2.  Energy transduction: proton transfer through the respiratory complexes.

Authors:  Jonathan P Hosler; Shelagh Ferguson-Miller; Denise A Mills
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

3.  Visualizing the protons in a metalloenzyme electron proton transfer pathway.

Authors:  Hanna Kwon; Jaswir Basran; Juliette M Devos; Reynier Suardíaz; Marc W van der Kamp; Adrian J Mulholland; Tobias E Schrader; Andreas Ostermann; Matthew P Blakeley; Peter C E Moody; Emma L Raven
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-09       Impact factor: 11.205

4.  Characterizing the proton loading site in cytochrome c oxidase.

Authors:  Jianxun Lu; M R Gunner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-11       Impact factor: 11.205

5.  Computational prediction and in vitro analysis of potential physiological ligands of the bile acid binding site in cytochrome c oxidase.

Authors:  Leann Buhrow; Carrie Hiser; Jeffrey R Van Voorst; Shelagh Ferguson-Miller; Leslie A Kuhn
Journal:  Biochemistry       Date:  2013-09-27       Impact factor: 3.162

6.  Crystallographic location and mutational analysis of Zn and Cd inhibitory sites and role of lipidic carboxylates in rescuing proton path mutants in cytochrome c oxidase.

Authors:  Ling Qin; Denise A Mills; Carrie Hiser; Anna Murphree; R Michael Garavito; Shelagh Ferguson-Miller; Jonathan Hosler
Journal:  Biochemistry       Date:  2007-05-04       Impact factor: 3.162

7.  Redox-coupled proton pumping in cytochrome c oxidase: further insights from computer simulation.

Authors:  Jiancong Xu; Gregory A Voth
Journal:  Biochim Biophys Acta       Date:  2007-12-04

8.  Communication between R481 and Cu(B) in cytochrome bo(3) ubiquinol oxidase from Escherichia coli.

Authors:  Tsuyoshi Egawa; Myat T Lin; Jonathan P Hosler; Robert B Gennis; Syun-Ru Yeh; Denis L Rousseau
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

9.  Properties of Arg481 mutants of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides suggest that neither R481 nor the nearby D-propionate of heme a3 is likely to be the proton loading site of the proton pump.

Authors:  Hyun Ju Lee; Linda Ojemyr; Ahmet Vakkasoglu; Peter Brzezinski; Robert B Gennis
Journal:  Biochemistry       Date:  2009-08-04       Impact factor: 3.162

10.  Functional importance of a pair of conserved glutamic acid residues and of Ca(2+) binding in the cbb(3)-type oxygen reductases from Rhodobacter sphaeroides and Vibrio cholerae.

Authors:  Hanlin Ouyang; Huazhi Han; Jung H Roh; James Hemp; Jonathan P Hosler; Robert B Gennis
Journal:  Biochemistry       Date:  2012-09-04       Impact factor: 3.162

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