Literature DB >> 16043448

Engineering allosteric protein switches by domain insertion.

Marc Ostermeier1.   

Abstract

Domain insertion is proving to be an effective way to construct hybrid proteins exhibiting switch-like behavior. In this strategy, two existing domains, the first exhibiting a signal recognition function and the second containing the function to be modulated, are fused such that the recognition of the signal by the first domain is transmitted to the second domain, thereby modulating its activity. Recent directed evolution experiments indicate that the structural space comprised of the recombination of unrelated protein domains may be rich in switching behavior, particularly when the circular permutation of domains is also employed. This bodes well for potential basic science, sensing and therapeutic applications of molecular switches.

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Year:  2005        PMID: 16043448     DOI: 10.1093/protein/gzi048

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  54 in total

1.  Directed evolution of mammalian anti-apoptosis proteins by somatic hypermutation.

Authors:  Brian S Majors; Gisela G Chiang; Nels E Pederson; Michael J Betenbaugh
Journal:  Protein Eng Des Sel       Date:  2011-12-09       Impact factor: 1.650

Review 2.  Allosteric regulation of protease activity by small molecules.

Authors:  Aimee Shen
Journal:  Mol Biosyst       Date:  2010-06-10

Review 3.  Converting a protein into a switch for biosensing and functional regulation.

Authors:  Margaret M Stratton; Stewart N Loh
Journal:  Protein Sci       Date:  2011-01       Impact factor: 6.725

4.  A protein switch sensing system for the quantification of sulfate.

Authors:  Krystal Teasley Hamorsky; Charles Mark Ensor; Patrizia Pasini; Sylvia Daunert
Journal:  Anal Biochem       Date:  2011-10-18       Impact factor: 3.365

5.  Dynamic protein domains: identification, interdependence, and stability.

Authors:  Semen O Yesylevskyy; Valery N Kharkyanen; Alexander P Demchenko
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

6.  An evolution-based strategy for engineering allosteric regulation.

Authors:  David Pincus; Orna Resnekov; Kimberly A Reynolds
Journal:  Phys Biol       Date:  2017-04-28       Impact factor: 2.583

7.  Thermodynamic analysis of an antagonistic folding-unfolding equilibrium between two protein domains.

Authors:  Thomas A Cutler; Stewart N Loh
Journal:  J Mol Biol       Date:  2007-06-02       Impact factor: 5.469

8.  Characterization of the 4D5Flu single-chain antibody with a stimulus-responsive elastin-like peptide linker: a potential reporter of peptide linker conformation.

Authors:  Mark A Blenner; Scott Banta
Journal:  Protein Sci       Date:  2008-01-24       Impact factor: 6.725

9.  An externally tunable bacterial band-pass filter.

Authors:  Takayuki Sohka; Richard A Heins; Ryan M Phelan; Jennifer M Greisler; Craig A Townsend; Marc Ostermeier
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-05       Impact factor: 11.205

10.  Protein switch engineering by domain insertion.

Authors:  Manu Kanwar; R Clay Wright; Amol Date; Jennifer Tullman; Marc Ostermeier
Journal:  Methods Enzymol       Date:  2013       Impact factor: 1.600

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