Literature DB >> 16040751

DNA cholesteric pitch as a function of density and ionic strength.

Christopher B Stanley1, Helen Hong, Helmut H Strey.   

Abstract

The nature of chiral interactions among chiral biopolymers, such as DNA, protein alpha-helices, and rodlike virus particles, remains elusive. In particular, a satisfactory model connecting molecular chiral interactions and the pitch of the resulting chiral mesophases is lacking. We report the measurement of short-fragment (146-bp) DNA cholesteric spherulite pitch as a function of osmotic pressure, average DNA interaxial spacing, and salt concentration. We determined cholesteric pitch and interaxial spacing by polarizing optical microscopy and x-ray scattering, respectively, from which the twist-angle between DNA molecules can be calculated. Surprisingly, we found that decreasing ionic strength resulted in weaker chiral interactions between DNA chains, as evidenced by the decrease in the twist-angle, and consequent increase in the cholesteric pitch, for a fixed interaxial spacing. We propose that this behavior can be explained by increased smearing-out of the helical charge pattern along DNA as the Debye screening length is increased.

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Year:  2005        PMID: 16040751      PMCID: PMC1366754          DOI: 10.1529/biophysj.105.064550

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  9 in total

1.  Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

2.  Electrostatic interaction between long, rigid helical macromolecules at all interaxial angles.

Authors:  A A Kornyshev; S Leikin
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  2000-08

3.  Twist in chiral interaction between biological helices.

Authors:  A A Kornyshev; S Leikin
Journal:  Phys Rev Lett       Date:  2000-03-13       Impact factor: 9.161

4.  Electron microscopy of liquid crystalline DNA: direct evidence for cholesteric-like organization of DNA in dinoflagellate chromosomes.

Authors:  R L Rill; F Livolant; H C Aldrich; M W Davidson
Journal:  Chromosoma       Date:  1989-10       Impact factor: 4.316

5.  Osmotic stress for the direct measurement of intermolecular forces.

Authors:  V A Parsegian; R P Rand; N L Fuller; D C Rau
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

6.  Macromolecules and water: probing with osmotic stress.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

7.  Cholesteric organization of DNA in vivo and in vitro.

Authors:  F Livolant
Journal:  Eur J Cell Biol       Date:  1984-03       Impact factor: 4.492

8.  What is the origin of chirality in the cholesteric phase of virus suspensions?

Authors:  Eric Grelet; Seth Fraden
Journal:  Phys Rev Lett       Date:  2003-05-16       Impact factor: 9.161

9.  Circular dichroism microscopy of compact forms of DNA and chromatin in vivo and in vitro: cholesteric liquid-crystalline phases of DNA and single dinoflagellate nuclei.

Authors:  F Livolant; M F Maestre
Journal:  Biochemistry       Date:  1988-04-19       Impact factor: 3.162

  9 in total
  8 in total

1.  Right-handed double-helix ultrashort DNA yields chiral nematic phases with both right- and left-handed director twist.

Authors:  Giuliano Zanchetta; Fabio Giavazzi; Michi Nakata; Marco Buscaglia; Roberto Cerbino; Noel A Clark; Tommaso Bellini
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

2.  Knotting of linear DNA in nano-slits and nano-channels: a numerical study.

Authors:  Enzo Orlandini; Cristian Micheletti
Journal:  J Biol Phys       Date:  2013-03-05       Impact factor: 1.365

3.  DNA-DNA interactions in bacteriophage capsids are responsible for the observed DNA knotting.

Authors:  Davide Marenduzzo; Enzo Orlandini; Andrzej Stasiak; De Witt Sumners; Luca Tubiana; Cristian Micheletti
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

4.  Re-entrant cholesteric phase in DNA liquid-crystalline dispersion particles.

Authors:  Yuri M Yevdokimov; Sergey G Skuridin; Sergey V Semenov; Ljubov A Dadinova; Viktor I Salyanov; Efim I Kats
Journal:  J Biol Phys       Date:  2016-12-27       Impact factor: 1.365

5.  Symmetry of electrostatic interaction between pyrophosphate DNA molecules.

Authors:  V L Golo; E I Kats; S A Kuznetsova; Yu S Volkov
Journal:  Eur Phys J E Soft Matter       Date:  2010-01-20       Impact factor: 1.890

6.  Effective stiffening of DNA due to nematic ordering causes DNA molecules packed in phage capsids to preferentially form torus knots.

Authors:  Daniel Reith; Peter Cifra; Andrzej Stasiak; Peter Virnau
Journal:  Nucleic Acids Res       Date:  2012-02-22       Impact factor: 16.971

7.  Six-fold director field configuration in amyloid nematic and cholesteric phases.

Authors:  Massimo Bagnani; Paride Azzari; Salvatore Assenza; Raffaele Mezzenga
Journal:  Sci Rep       Date:  2019-09-02       Impact factor: 4.379

8.  Chiral shape fluctuations and the origin of chirality in cholesteric phases of DNA origamis.

Authors:  Maxime M C Tortora; Garima Mishra; Domen Prešern; Jonathan P K Doye
Journal:  Sci Adv       Date:  2020-07-29       Impact factor: 14.136

  8 in total

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