Literature DB >> 16039583

Histone modifications associated with somatic hypermutation.

Valerie H Odegard1, Sean T Kim, Shannon M Anderson, Mark J Shlomchik, David G Schatz.   

Abstract

A number of modified histones, including acetylated H3 and H4 and phosphorylated H2AX (gammaH2AX), are associated with V(D)J recombination and class switch recombination (CSR). In contrast, little is known concerning the chromatin modifications associated with somatic hypermutation (SHM) in vivo. Here, we report that several modifications--including histone acetylation and H3-lysine 4 methylation--fail to demarcate an actively hypermutating immunoglobulin (Ig) locus or to correlate spatially with SHM within Ig loci. Furthermore, no obvious association between SHM and gammaH2AX could be detected. Instead, we find that the phosphorylated form of histone H2B (H2B(Ser14P)) correlates tightly with SHM and CSR. Phosphorylation of H2B within Ig variable and switch regions requires AID and may be mediated by the histone kinase Mst1. These findings indicate that SHM and CSR trigger distinct DNA damage responses and identify a novel histone modification pattern for SHM consisting of H2B(Ser14P) in the absence of gammaH2AX.

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Year:  2005        PMID: 16039583     DOI: 10.1016/j.immuni.2005.05.007

Source DB:  PubMed          Journal:  Immunity        ISSN: 1074-7613            Impact factor:   31.745


  35 in total

1.  Nonimmunoglobulin target loci of activation-induced cytidine deaminase (AID) share unique features with immunoglobulin genes.

Authors:  Lucia Kato; Nasim A Begum; A Maxwell Burroughs; Tomomitsu Doi; Jun Kawai; Carsten O Daub; Takahisa Kawaguchi; Fumihiko Matsuda; Yoshihide Hayashizaki; Tasuku Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

2.  Nucleotide excision repair in an immunoglobulin variable gene is less efficient than in a housekeeping gene.

Authors:  Rudaina H Alrefai; David B Winter; Vilhelm A Bohr; Patricia J Gearhart
Journal:  Mol Immunol       Date:  2007-03-01       Impact factor: 4.407

Review 3.  Cytometry of ATM activation and histone H2AX phosphorylation to estimate extent of DNA damage induced by exogenous agents.

Authors:  Toshiki Tanaka; Xuan Huang; H Dorota Halicka; Hong Zhao; Frank Traganos; Anthony P Albino; Wei Dai; Zbigniew Darzynkiewicz
Journal:  Cytometry A       Date:  2007-09       Impact factor: 4.355

Review 4.  Autoreactive B cells and epigenetics.

Authors:  Yves Renaudineau; Soizic Garaud; Christelle Le Dantec; Ruby Alonso-Ramirez; Capucine Daridon; Pierre Youinou
Journal:  Clin Rev Allergy Immunol       Date:  2010-08       Impact factor: 8.667

5.  Molecular genetic analysis of an SNF2/brahma-related gene in Tetrahymena thermophila suggests roles in growth and nuclear development.

Authors:  Jeffrey S Fillingham; Jyoti Garg; Nora Tsao; Nama Vythilingum; Takamitsu Nishikawa; Ronald E Pearlman
Journal:  Eukaryot Cell       Date:  2006-08

Review 6.  Cellular and chromatin dynamics of antibody-secreting plasma cells.

Authors:  Alexandra Bortnick; Cornelis Murre
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2015-10-21       Impact factor: 5.814

7.  H3 trimethyl K9 and H3 acetyl K9 chromatin modifications are associated with class switch recombination.

Authors:  Fei Li Kuang; Zhonghui Luo; Matthew D Scharff
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-10       Impact factor: 11.205

8.  ADAR1 protein induces adenosine-targeted DNA mutations in senescent Bcl6 gene-deficient cells.

Authors:  Nobuhide Tsuruoka; Masafumi Arima; Nobuya Yoshida; Seiji Okada; Akemi Sakamoto; Masahiko Hatano; Hisae Satake; Eggi Arguni; Ji-Yang Wang; Jing-Hua Yang; Kazuko Nishikura; Souei Sekiya; Makio Shozu; Takeshi Tokuhisa
Journal:  J Biol Chem       Date:  2012-12-03       Impact factor: 5.157

9.  HoxC4 binds to the promoter of the cytidine deaminase AID gene to induce AID expression, class-switch DNA recombination and somatic hypermutation.

Authors:  Seok-Rae Park; Hong Zan; Zsuzsanna Pal; Jinsong Zhang; Ahmed Al-Qahtani; Egest J Pone; Zhenming Xu; Thach Mai; Paolo Casali
Journal:  Nat Immunol       Date:  2009-04-12       Impact factor: 25.606

10.  Attracting AID to targets of somatic hypermutation.

Authors:  Atsushi Tanaka; Hong Ming Shen; Sarayu Ratnam; Prashant Kodgire; Ursula Storb
Journal:  J Exp Med       Date:  2010-01-25       Impact factor: 14.307

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