Literature DB >> 16014419

The structure of the 80S ribosome from Trypanosoma cruzi reveals unique rRNA components.

Haixiao Gao1, Maximiliano Juri Ayub, Mariano J Levin, Joachim Frank.   

Abstract

We present analysis, by cryo-electron microscopy and single-particle reconstruction, of the structure of the 80S ribosome from Trypanosoma cruzi, the kinetoplastid protozoan pathogen that causes Chagas disease. The density map of the T. cruzi 80S ribosome shows the phylogenetically conserved eukaryotic rRNA core structure, together with distinctive structural features in both the small and large subunits. Remarkably, a previously undescribed helical structure appears in the small subunit in the vicinity of the mRNA exit channel. We propose that this rRNA structure likely participates in the recruitment of ribosome onto the 5' end of mRNA, in facilitating and modulating the initiation of translation that is unique to the trypanosomes.

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Year:  2005        PMID: 16014419      PMCID: PMC1174928          DOI: 10.1073/pnas.0500926102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

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Journal:  Cell       Date:  2000-03-03       Impact factor: 41.582

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Authors:  J Wuyts; P De Rijk; Y Van de Peer; G Pison; P Rousseeuw; R De Wachter
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

Review 3.  Internal ribosome entry sites in eukaryotic mRNA molecules.

Authors:  C U Hellen; P Sarnow
Journal:  Genes Dev       Date:  2001-07-01       Impact factor: 11.361

4.  A method for differentiating proteins from nucleic acids in intermediate-resolution density maps: cryo-electron microscopy defines the quaternary structure of the Escherichia coli 70S ribosome.

Authors:  C M Spahn; P A Penczek; A Leith; J Frank
Journal:  Structure       Date:  2000-09-15       Impact factor: 5.006

5.  Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution.

Authors:  M G Gomez-Lorenzo; C M Spahn; R K Agrawal; R A Grassucci; P Penczek; K Chakraburtty; J P Ballesta; J L Lavandera; J F Garcia-Bustos; J Frank
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

6.  The Leishmania tarentolae spliced leader contains determinants for association with polysomes.

Authors:  Gusti M Zeiner; Nancy R Sturm; David A Campbell
Journal:  J Biol Chem       Date:  2003-07-22       Impact factor: 5.157

7.  Direct analysis of protein complexes using mass spectrometry.

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8.  Acidic ribosomal P proteins are phosphorylated in Trypanosoma cruzi.

Authors:  E B Gómez; G Medina; J P Ballesta; M J Levin; M T Téllez-Iñón
Journal:  Int J Parasitol       Date:  2001-08       Impact factor: 3.981

9.  Translation initiation in Leishmania major: characterisation of multiple eIF4F subunit homologues.

Authors:  Rafael Dhalia; Christian R S Reis; Eden R Freire; Pollyanna O Rocha; Rodolfo Katz; João R C Muniz; Nancy Standart; Osvaldo P de Melo Neto
Journal:  Mol Biochem Parasitol       Date:  2005-03       Impact factor: 1.759

10.  The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs.

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Journal:  BMC Bioinformatics       Date:  2002-01-17       Impact factor: 3.169

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  30 in total

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Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  Complete cap 4 formation is not required for viability in Trypanosoma brucei.

Authors:  Jesse R Zamudio; Bidyottam Mittra; Gusti M Zeiner; Marcin Feder; Janusz M Bujnicki; Nancy R Sturm; David A Campbell
Journal:  Eukaryot Cell       Date:  2006-06

3.  Differences in the path to exit the ribosome across the three domains of life.

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Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

4.  The RACK1 homologue from Trypanosoma brucei is required for the onset and progression of cytokinesis.

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5.  Structure of the mammalian 80S ribosome at 8.7 A resolution.

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Journal:  Structure       Date:  2008-04       Impact factor: 5.006

6.  Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit.

Authors:  Zheng Liu; Cristina Gutierrez-Vargas; Jia Wei; Robert A Grassucci; Madhumitha Ramesh; Noel Espina; Ming Sun; Beril Tutuncuoglu; Susan Madison-Antenucci; John L Woolford; Liang Tong; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-10       Impact factor: 11.205

Review 7.  New Insights into Ribosome Structure and Function.

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Journal:  Cold Spring Harb Perspect Biol       Date:  2019-01-02       Impact factor: 10.005

8.  Association of a novel preribosomal complex in Trypanosoma brucei determined by fluorescence resonance energy transfer.

Authors:  Lei Wang; Martin Ciganda; Noreen Williams
Journal:  Eukaryot Cell       Date:  2012-12-21

Review 9.  Ribosomal RNA gene transcription in trypanosomes.

Authors:  Roberto Hernández; Ana María Cevallos
Journal:  Parasitol Res       Date:  2014-05-15       Impact factor: 2.289

10.  Binding specificities and potential roles of isoforms of eukaryotic initiation factor 4E in Leishmania.

Authors:  Yael Yoffe; Joanna Zuberek; Asaf Lerer; Magdalena Lewdorowicz; Janusz Stepinski; Michael Altmann; Edward Darzynkiewicz; Michal Shapira
Journal:  Eukaryot Cell       Date:  2006-10-13
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