Literature DB >> 16012529

Silence of the genes--mechanisms of long-term repression.

Laura Lande-Diner1, Howard Cedar.   

Abstract

A large fraction of genes in the mammalian genome is repressed in every cell throughout development. Here, we propose that this long-term silencing is carried out by distinct molecular mechanisms that operate in a global manner and, once established, can be maintained autonomously through DNA replication. Both individually and in combination these mechanisms bring about repression, mainly by lowering gene accessibility through closed chromatin structures.

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Year:  2005        PMID: 16012529     DOI: 10.1038/nrg1639

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  25 in total

1.  Ring1B and Suv39h1 delineate distinct chromatin states at bivalent genes during early mouse lineage commitment.

Authors:  Olivia Alder; Fabrice Lavial; Anne Helness; Emily Brookes; Sandra Pinho; Anil Chandrashekran; Philippe Arnaud; Ana Pombo; Laura O'Neill; Véronique Azuara
Journal:  Development       Date:  2010-06-23       Impact factor: 6.868

2.  Assisted reproductive technologies do not alter mutation frequency or spectrum.

Authors:  Lee Caperton; Patricia Murphey; Yukiko Yamazaki; C Alex McMahan; Christi A Walter; Ryuzo Yanagimachi; John R McCarrey
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-02       Impact factor: 11.205

Review 3.  Linking DNA methylation and histone modification: patterns and paradigms.

Authors:  Howard Cedar; Yehudit Bergman
Journal:  Nat Rev Genet       Date:  2009-05       Impact factor: 53.242

Review 4.  High-throughput sequencing offers new insights into 5-hydroxymethylcytosine.

Authors:  Alina P S Pang; Christopher Sugai; Alika K Maunakea
Journal:  Biomol Concepts       Date:  2016-06-01

5.  Shifts in replication timing actively affect histone acetylation during nucleosome reassembly.

Authors:  Laura Lande-Diner; Jianmin Zhang; Howard Cedar
Journal:  Mol Cell       Date:  2009-06-26       Impact factor: 17.970

Review 6.  Bookmarking the genome: maintenance of epigenetic information.

Authors:  Sayyed K Zaidi; Daniel W Young; Martin Montecino; Andre J van Wijnen; Janet L Stein; Jane B Lian; Gary S Stein
Journal:  J Biol Chem       Date:  2011-03-24       Impact factor: 5.157

7.  Clonal allelic predetermination of immunoglobulin-κ rearrangement.

Authors:  Marganit Farago; Chaggai Rosenbluh; Maya Tevlin; Shira Fraenkel; Sharon Schlesinger; Hagit Masika; Masha Gouzman; Grace Teng; David Schatz; Yoach Rais; Jacob H Hanna; Alexander Mildner; Steffen Jung; Gustavo Mostoslavsky; Howard Cedar; Yehudit Bergman
Journal:  Nature       Date:  2012-09-30       Impact factor: 49.962

Review 8.  Targeting deregulated epigenetic control in cancer.

Authors:  Sayyed K Zaidi; Andre J Van Wijnen; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  J Cell Physiol       Date:  2013-11       Impact factor: 6.384

9.  Insulin but not glucagon gene is silenced in human pancreas-derived mesenchymal stem cells.

Authors:  Leah M Wilson; Stephen H K Wong; Ningpu Yu; Elizabeth Geras-Raaka; Bruce M Raaka; Marvin C Gershengorn
Journal:  Stem Cells       Date:  2009-11       Impact factor: 6.277

Review 10.  A revisionist replicon model for higher eukaryotic genomes.

Authors:  J L Hamlin; L D Mesner; O Lar; R Torres; S V Chodaparambil; L Wang
Journal:  J Cell Biochem       Date:  2008-10-01       Impact factor: 4.429

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