Literature DB >> 21454629

Bookmarking the genome: maintenance of epigenetic information.

Sayyed K Zaidi1, Daniel W Young, Martin Montecino, Andre J van Wijnen, Janet L Stein, Jane B Lian, Gary S Stein.   

Abstract

Mitotic inheritance of gene function is obligatory to sustain biological control. Emerging evidence suggests that epigenetic mechanisms are linked to transmission of cell fate, lineage commitment, and maintenance of cellular phenotype in progeny cells. Mechanisms of epigenetic memory include gene silencing by DNA methylation, transcriptional regulation by histone modifications, regulation of gene expression by noncoding small RNA molecules, and retention of regulatory machinery on target gene loci for activation and repression. We will focus on the regulatory implications of epigenetic memory for physiological control and for the onset and progression of disease.

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Year:  2011        PMID: 21454629      PMCID: PMC3099651          DOI: 10.1074/jbc.R110.197061

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  92 in total

1.  The enzymatic methylation of RNA and DNA.

Authors:  M GOLD; J HURWITZ; M ANDERS
Journal:  Biochem Biophys Res Commun       Date:  1963-04-23       Impact factor: 3.575

Review 2.  Non-coding-RNA regulators of RNA polymerase II transcription.

Authors:  James A Goodrich; Jennifer F Kugel
Journal:  Nat Rev Mol Cell Biol       Date:  2006-05-24       Impact factor: 94.444

3.  Mitotic occupancy and lineage-specific transcriptional control of rRNA genes by Runx2.

Authors:  Daniel W Young; Mohammad Q Hassan; Jitesh Pratap; Mario Galindo; Sayyed K Zaidi; Suk-hee Lee; Xiaoqing Yang; Ronglin Xie; Amjad Javed; Jean M Underwood; Paul Furcinitti; Anthony N Imbalzano; Sheldon Penman; Jeffrey A Nickerson; Martin A Montecino; Jane B Lian; Janet L Stein; Andre J van Wijnen; Gary S Stein
Journal:  Nature       Date:  2007-01-25       Impact factor: 49.962

Review 4.  Epigenetics: a landscape takes shape.

Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

5.  Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription.

Authors:  Ray Kit Ng; J B Gurdon
Journal:  Nat Cell Biol       Date:  2007-12-09       Impact factor: 28.824

Review 6.  The transplantation of living cell nuclei.

Authors:  J B Gurdon
Journal:  Adv Morphog       Date:  1964

7.  HP1 binding to chromatin methylated at H3K9 is enhanced by auxiliary factors.

Authors:  Ragnhild Eskeland; Anton Eberharter; Axel Imhof
Journal:  Mol Cell Biol       Date:  2006-11-13       Impact factor: 4.272

Review 8.  Regulatory controls for osteoblast growth and differentiation: role of Runx/Cbfa/AML factors.

Authors:  Jane B Lian; Amjad Javed; S Kaleem Zaidi; Christopher Lengner; Martin Montecino; Andre J van Wijnen; Janet L Stein; Gary S Stein
Journal:  Crit Rev Eukaryot Gene Expr       Date:  2004       Impact factor: 1.807

9.  Mitotic transcription repression in vivo in the absence of nucleosomal chromatin condensation.

Authors:  C A Spencer; M J Kruhlak; H L Jenkins; X Sun; D P Bazett-Jones
Journal:  J Cell Biol       Date:  2000-07-10       Impact factor: 10.539

10.  Cloning by functional complementation of a mouse cDNA encoding a homologue of CDC25, a Saccharomyces cerevisiae RAS activator.

Authors:  E Martegani; M Vanoni; R Zippel; P Coccetti; R Brambilla; C Ferrari; E Sturani; L Alberghina
Journal:  EMBO J       Date:  1992-06       Impact factor: 11.598

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  34 in total

Review 1.  MicroRNA control of bone formation and homeostasis.

Authors:  Jane B Lian; Gary S Stein; Andre J van Wijnen; Janet L Stein; Mohammad Q Hassan; Tripti Gaur; Ying Zhang
Journal:  Nat Rev Endocrinol       Date:  2012-01-31       Impact factor: 43.330

Review 2.  Epigenetic memories: structural marks or active circuits?

Authors:  Floriane Nicol-Benoît; Pascale Le-Goff; Yves Le-Dréan; Florence Demay; Farzad Pakdel; Gilles Flouriot; Denis Michel
Journal:  Cell Mol Life Sci       Date:  2012-02-14       Impact factor: 9.261

3.  Two-step epigenetic Mendelian randomization: a strategy for establishing the causal role of epigenetic processes in pathways to disease.

Authors:  Caroline L Relton; George Davey Smith
Journal:  Int J Epidemiol       Date:  2012-02       Impact factor: 7.196

4.  Mitotic Inheritance of mRNA Facilitates Translational Activation of the Osteogenic-Lineage Commitment Factor Runx2 in Progeny of Osteoblastic Cells.

Authors:  Nelson Varela; Alejandra Aranguiz; Carlos Lizama; Hugo Sepulveda; Marcelo Antonelli; Roman Thaler; Ricardo D Moreno; Martin Montecino; Gary S Stein; Andre J van Wijnen; Mario Galindo
Journal:  J Cell Physiol       Date:  2015-09-18       Impact factor: 6.384

5.  A novel Lipidoid-MicroRNA formulation promotes calvarial bone regeneration.

Authors:  Lei Sui; Ming Wang; Qianqian Han; Liming Yu; Lan Zhang; Leilei Zheng; Junxiang Lian; Jin Zhang; Paloma Valverde; Qiaobing Xu; Qisheng Tu; Jake Chen
Journal:  Biomaterials       Date:  2018-05-23       Impact factor: 12.479

6.  Comparison of Nuclear Matrix and Mitotic Chromosome Scaffold Proteins in Drosophila S2 Cells-Transmission of Hallmarks of Nuclear Organization Through Mitosis.

Authors:  Rahul Sureka; Rashi Wadhwa; Suman S Thakur; Rashmi U Pathak; Rakesh K Mishra
Journal:  Mol Cell Proteomics       Date:  2018-07-10       Impact factor: 5.911

Review 7.  Chromatin-linked determinants of zygotic genome activation.

Authors:  Olga Østrup; Ingrid S Andersen; Philippe Collas
Journal:  Cell Mol Life Sci       Date:  2012-09-11       Impact factor: 9.261

8.  Nuclear calcium signaling regulates nuclear export of a subset of class IIa histone deacetylases following synaptic activity.

Authors:  Friederike Schlumm; Daniela Mauceri; H Eckehard Freitag; Hilmar Bading
Journal:  J Biol Chem       Date:  2013-01-30       Impact factor: 5.157

9.  Structural maintenance of chromosome complexes and bone development: the beginning of a wonderful relationship?

Authors:  Miri Cohen-Zinder; Miri Zinder-Cohen; David Karasik; Itay Onn
Journal:  Bonekey Rep       Date:  2013-08-07

Review 10.  Nuclear organization mediates cancer-compromised genetic and epigenetic control.

Authors:  Sayyed K Zaidi; Andrew J Fritz; Kirsten M Tracy; Jonathan A Gordon; Coralee E Tye; Joseph Boyd; Andre J Van Wijnen; Jeffrey A Nickerson; Antony N Imbalzano; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  Adv Biol Regul       Date:  2018-05-09
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