Literature DB >> 16006529

The cost of replication fidelity in an RNA virus.

Victoria Furió1, Andrés Moya, Rafael Sanjuán.   

Abstract

It is often argued that high mutation rates are advantageous for RNA viruses, because they confer elevated rates of adaptation. However, there is no direct evidence showing a positive correlation between mutation and adaptation rates among RNA viruses. Moreover, theoretical work does not argue in favor of this prediction. We used a series of vesicular stomatitis virus clones harboring single amino acid substitutions in the RNA polymerase to demonstrate that changes inducing enhanced fidelity paid a fitness cost, but that there was no positive correlation between mutation an adaptation rates. We demonstrate that the observed mutation rate in vesicular stomatitis virus can be explained by a trade-off between replication rate and replication fidelity.

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Year:  2005        PMID: 16006529      PMCID: PMC1177365          DOI: 10.1073/pnas.0501062102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Mutations in the primer grip region of HIV reverse transcriptase can increase replication fidelity.

Authors:  M Wisniewski; C Palaniappan; Z Fu; S F Le Grice; P Fay; R A Bambara
Journal:  J Biol Chem       Date:  1999-10-01       Impact factor: 5.157

2.  Pervasive compensatory adaptation in Escherichia coli.

Authors:  F B Moore; D E Rozen; R E Lenski
Journal:  Proc Biol Sci       Date:  2000-03-07       Impact factor: 5.349

3.  High fidelity of yellow fever virus RNA polymerase.

Authors:  Konstantin V Pugachev; Farshad Guirakhoo; Simeon W Ocran; Fred Mitchell; Megan Parsons; Caroline Penal; Soheila Girakhoo; Svetlana O Pougatcheva; Juan Arroyo; Dennis W Trent; Thomas P Monath
Journal:  J Virol       Date:  2004-01       Impact factor: 5.103

4.  Evolution of high mutation rates in experimental populations of E. coli.

Authors:  P D Sniegowski; P J Gerrish; R E Lenski
Journal:  Nature       Date:  1997-06-12       Impact factor: 49.962

5.  The hitch-hiking effect of a favourable gene.

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Journal:  Genet Res       Date:  1974-02       Impact factor: 1.588

6.  Kinetic proofreading in T-cell receptor signal transduction.

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Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-23       Impact factor: 11.205

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Authors:  J W Drake
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

Review 8.  Rapid evolution of RNA genomes.

Authors:  J Holland; K Spindler; F Horodyski; E Grabau; S Nichol; S VandePol
Journal:  Science       Date:  1982-03-26       Impact factor: 47.728

9.  Uniquely altered DNA replication fidelity conferred by an amino acid change in the nucleotide binding pocket of human immunodeficiency virus type 1 reverse transcriptase.

Authors:  D A Lewis; K Bebenek; W A Beard; S H Wilson; T A Kunkel
Journal:  J Biol Chem       Date:  1999-11-12       Impact factor: 5.157

10.  Effects of amino acid substitutions at position 115 on the fidelity of human immunodeficiency virus type 1 reverse transcriptase.

Authors:  P L Boyer; S H Hughes
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

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  45 in total

Review 1.  Viral mutation rates.

Authors:  Rafael Sanjuán; Miguel R Nebot; Nicola Chirico; Louis M Mansky; Robert Belshaw
Journal:  J Virol       Date:  2010-07-21       Impact factor: 5.103

Review 2.  Mutational fitness effects in RNA and single-stranded DNA viruses: common patterns revealed by site-directed mutagenesis studies.

Authors:  Rafael Sanjuán
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-06-27       Impact factor: 6.237

3.  Chaos and order in spontaneous mutation.

Authors:  John W Drake
Journal:  Genetics       Date:  2006-05       Impact factor: 4.562

4.  Theory of lethal mutagenesis for viruses.

Authors:  J J Bull; R Sanjuán; C O Wilke
Journal:  J Virol       Date:  2007-01-03       Impact factor: 5.103

5.  HIV-1 Transmission, Replication Fitness and Disease Progression.

Authors:  Tasha Biesinger; Jason T Kimata
Journal:  Virology (Auckl)       Date:  2008-07-14

6.  Point mutation rate of bacteriophage PhiX174.

Authors:  José M Cuevas; Siobain Duffy; Rafael Sanjuán
Journal:  Genetics       Date:  2009-08-03       Impact factor: 4.562

7.  The relationship between mutation frequency and replication strategy in positive-sense single-stranded RNA viruses.

Authors:  Gaël Thébaud; Joël Chadoeuf; Marco J Morelli; John W McCauley; Daniel T Haydon
Journal:  Proc Biol Sci       Date:  2009-11-11       Impact factor: 5.349

8.  Viral mutation rates: modelling the roles of within-host viral dynamics and the trade-off between replication fidelity and speed.

Authors:  Roland R Regoes; Steven Hamblin; Mark M Tanaka
Journal:  Proc Biol Sci       Date:  2012-11-07       Impact factor: 5.349

Review 9.  Experimental evolution and the dynamics of genomic mutation rate modifiers.

Authors:  Y Raynes; P D Sniegowski
Journal:  Heredity (Edinb)       Date:  2014-05-21       Impact factor: 3.821

10.  Variable mutation rates as an adaptive strategy in replicator populations.

Authors:  Michael Stich; Susanna C Manrubia; Ester Lázaro
Journal:  PLoS One       Date:  2010-06-17       Impact factor: 3.240

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