Literature DB >> 15981519

Measurement of the effective focal shift in an optical trap.

Keir C Neuman1, Elio A Abbondanzieri, Steven M Block.   

Abstract

The focus of an oil-immersion microscope objective is shifted because of the refractive-index mismatch between the cover glass and the aqueous sample. We present a procedure with which to determine the focal shift by use of an inverted microscope equipped with optical tweezers. As the position of the sample chamber is scanned vertically, we measure the axial displacement of an optically trapped bead; the relative motion of the bead with respect to the surface supplies the effective focal shift. Measurements of this quantity deviate from electromagnetic calculations of the focal shift, a discrepancy attributable to the depth-dependent decrease in axial trap stiffness that arises from spherical aberration.

Year:  2005        PMID: 15981519      PMCID: PMC1483143          DOI: 10.1364/ol.30.001318

Source DB:  PubMed          Journal:  Opt Lett        ISSN: 0146-9592            Impact factor:   3.776


  4 in total

1.  Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking.

Authors:  Keir C Neuman; Elio A Abbondanzieri; Robert Landick; Jeff Gelles; Steven M Block
Journal:  Cell       Date:  2003-11-14       Impact factor: 41.582

2.  Influence of a glass-water interface on the on-axis trapping of micrometer-sized spherical objects by optical tweezers.

Authors:  Erik Fällman; Ove Axner
Journal:  Appl Opt       Date:  2003-07-01       Impact factor: 1.980

3.  Optical trapping.

Authors:  Keir C Neuman; Steven M Block
Journal:  Rev Sci Instrum       Date:  2004-09       Impact factor: 1.523

4.  Interference model for back-focal-plane displacement detection in optical tweezers.

Authors:  F Gittes; C F Schmidt
Journal:  Opt Lett       Date:  1998-01-01       Impact factor: 3.776

  4 in total
  18 in total

1.  Three-dimensional superresolution colocalization of intracellular protein superstructures and the cell surface in live Caulobacter crescentus.

Authors:  Matthew D Lew; Steven F Lee; Jerod L Ptacin; Marissa K Lee; Robert J Twieg; Lucy Shapiro; W E Moerner
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-26       Impact factor: 11.205

2.  Optical traps to study properties of molecular motors.

Authors:  James A Spudich; Sarah E Rice; Ronald S Rock; Thomas J Purcell; Hans M Warrick
Journal:  Cold Spring Harb Protoc       Date:  2011-11-01

3.  Detection of forces and displacements along the axial direction in an optical trap.

Authors:  Christopher Deufel; Michelle D Wang
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

4.  Pulling on the nascent RNA during transcription does not alter kinetics of elongation or ubiquitous pausing.

Authors:  Ravindra V Dalal; Matthew H Larson; Keir C Neuman; Jeff Gelles; Robert Landick; Steven M Block
Journal:  Mol Cell       Date:  2006-07-21       Impact factor: 17.970

5.  High-resolution solid modeling of biological samples imaged with 3D fluorescence microscopy.

Authors:  Michael C Ferko; Brian W Patterson; Peter J Butler
Journal:  Microsc Res Tech       Date:  2006-08       Impact factor: 2.769

6.  Elasticity of short DNA molecules: theory and experiment for contour lengths of 0.6-7 microm.

Authors:  Yeonee Seol; Jinyu Li; Philip C Nelson; Thomas T Perkins; M D Betterton
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

7.  Stretching submicron biomolecules with constant-force axial optical tweezers.

Authors:  Yih-Fan Chen; Gerhard A Blab; Jens-Christian Meiners
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

8.  The reciprocal coordination and mechanics of molecular motors in living cells.

Authors:  Jeneva A Laib; John A Marin; Robert A Bloodgood; William H Guilford
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

Review 9.  Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy.

Authors:  Keir C Neuman; Attila Nagy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

Review 10.  Axial Optical Traps: A New Direction for Optical Tweezers.

Authors:  Samuel Yehoshua; Russell Pollari; Joshua N Milstein
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033

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