Literature DB >> 15963534

General methodology for nonlinear modeling of neural systems with Poisson point-process inputs.

V Z Marmarelis1, T W Berger.   

Abstract

This paper presents a general methodological framework for the practical modeling of neural systems with point-process inputs (sequences of action potentials or, more broadly, identical events) based on the Volterra and Wiener theories of functional expansions and system identification. The paper clarifies the distinctions between Volterra and Wiener kernels obtained from Poisson point-process inputs. It shows that only the Wiener kernels can be estimated via cross-correlation, but must be defined as zero along the diagonals. The Volterra kernels can be estimated far more accurately (and from shorter data-records) by use of the Laguerre expansion technique adapted to point-process inputs, and they are independent of the mean rate of stimulation (unlike their P-W counterparts that depend on it). The Volterra kernels can also be estimated for broadband point-process inputs that are not Poisson. Useful applications of this modeling approach include cases where we seek to determine (model) the transfer characteristics between one neuronal axon (a point-process 'input') and another axon (a point-process 'output') or some other measure of neuronal activity (a continuous 'output', such as population activity) with which a causal link exists.

Mesh:

Year:  2005        PMID: 15963534     DOI: 10.1016/j.mbs.2005.04.002

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  19 in total

1.  Understanding spike-triggered covariance using Wiener theory for receptive field identification.

Authors:  Roman A Sandler; Vasilis Z Marmarelis
Journal:  J Vis       Date:  2015       Impact factor: 2.240

2.  Modeling the nonlinear dynamic interactions of afferent pathways in the dentate gyrus of the hippocampus.

Authors:  Angelika Dimoka; Spiros H Courellis; Vasilis Z Marmarelis; Theodore W Berger
Journal:  Ann Biomed Eng       Date:  2008-02-26       Impact factor: 3.934

3.  Modeling the nonlinear properties of the in vitro hippocampal perforant path-dentate system using multielectrode array technology.

Authors:  Angelika Dimoka; Spiros H Courellis; Ghassan I Gholmieh; Vasilis Z Marmarelis; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2008-02       Impact factor: 4.538

4.  Parametric and non-parametric modeling of short-term synaptic plasticity. Part II: Experimental study.

Authors:  Dong Song; Zhuo Wang; Vasilis Z Marmarelis; Theodore W Berger
Journal:  J Comput Neurosci       Date:  2008-05-27       Impact factor: 1.621

5.  Boolean modeling of neural systems with point-process inputs and outputs. Part I: theory and simulations.

Authors:  Vasilis Z Marmarelis; Theodoros P Zanos; Theodore W Berger
Journal:  Ann Biomed Eng       Date:  2009-06-11       Impact factor: 3.934

6.  A cortical neural prosthesis for restoring and enhancing memory.

Authors:  Theodore W Berger; Robert E Hampson; Dong Song; Anushka Goonawardena; Vasilis Z Marmarelis; Sam A Deadwyler
Journal:  J Neural Eng       Date:  2011-06-15       Impact factor: 5.379

7.  A cognitive prosthesis for memory facilitation by closed-loop functional ensemble stimulation of hippocampal neurons in primate brain.

Authors:  Sam A Deadwyler; Robert E Hampson; Dong Song; Ioan Opris; Greg A Gerhardt; Vasilis Z Marmarelis; Theodore W Berger
Journal:  Exp Neurol       Date:  2016-05-24       Impact factor: 5.330

8.  A hippocampal cognitive prosthesis: multi-input, multi-output nonlinear modeling and VLSI implementation.

Authors:  Theodore W Berger; Dong Song; Rosa H M Chan; Vasilis Z Marmarelis; Jeff LaCoss; Jack Wills; Robert E Hampson; Sam A Deadwyler; John J Granacki
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2012-03       Impact factor: 3.802

9.  Facilitation of memory encoding in primate hippocampus by a neuroprosthesis that promotes task-specific neural firing.

Authors:  Robert E Hampson; Dong Song; Ioan Opris; Lucas M Santos; Dae C Shin; Greg A Gerhardt; Vasilis Z Marmarelis; Theodore W Berger; Sam A Deadwyler
Journal:  J Neural Eng       Date:  2013-11-12       Impact factor: 5.379

10.  Design of optimal stimulation patterns for neuronal ensembles based on Volterra-type hierarchical modeling.

Authors:  V Z Marmarelis; D C Shin; R E Hampson; S A Deadwyler; D Song; T W Berger
Journal:  J Neural Eng       Date:  2012-10-17       Impact factor: 5.379

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