Literature DB >> 15961170

Quantitative detection of HIV-1 RNA using NucliSens EasyQ HIV-1 assay.

Jun Yao1, Zhen Liu, Lung-Sang Ko, Gang Pan, Yan Jiang.   

Abstract

HIV-1 RNA viral load has become the major biological marker for disease prognosis and outcome of antiretroviral therapy in the treatment of HIV-infected individuals. The aim of this study was to compare the performance of the new CE marked NucliSens EasyQ HIV-1 assay with NucliSens HIV-1 QT assay (reference method). NucliSens EasyQ HIV-1 (EasyQ) couples nucleic acid sequence-based amplification (NASBA) with real-time detection using molecular beacons utilizing the NucliSens EasyQ analyzer. NASBA is a sensitive, isothermal, transcription-based amplification system designed specifically for the detection of RNA targets. There was significant correlation (r = 0.878, P < 0.0001) between the two different assays in the analysis of clinical samples and the frequency of concordant results (log difference <0.5) was 74%. The two assays detected HIV-1 RNA in 81 specimens, and neither detected (below the lower detection limit, 400 copies/ml for NucliSens HIV-1 QT and 500IU/ml for EasyQ) HIV-1 RNA in 12 specimens. Three clinical specimens had detectable HIV-1 RNA using the EasyQ only, and two specimens had detectable HIV-1 RNA using the NucliSens HIV-1 QT only. The EasyQ procedure can analyze 48 clinical samples within 6h. The coefficient of variation of EasyQ ranged from 3.0 to 9.5% (3% at 4.9 log; 5.7% at 3.7 log; 9.5% at 2.7 log). The new assay is shown to be a rapid, convenient, and reliable procedure for HIV-1 RNA viral load monitoring.

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Year:  2005        PMID: 15961170     DOI: 10.1016/j.jviromet.2005.04.017

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  9 in total

1.  Performance of NucliSens HIV-1 EasyQ Version 2.0 compared with six commercially available quantitative nucleic acid assays for detection of HIV-1 in China.

Authors:  Sihong Xu; Aijing Song; Jianhui Nie; Xiuhua Li; Youchun Wang
Journal:  Mol Diagn Ther       Date:  2010-10-01       Impact factor: 4.074

2.  Evaluation of a real-time nucleic acid sequence-based amplification assay using molecular beacons for detection of human immunodeficiency virus type 1.

Authors:  D R McClernon; C Vavro; M St Clair
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

3.  Detection of HIV-1 minority variants containing the K103N drug-resistance mutation using a simple method to amplify RNA targets (SMART).

Authors:  Kenneth Morabito; Rami Kantor; Warren Tai; Leeann Schreier; Anubhav Tripathi
Journal:  J Mol Diagn       Date:  2013-03-29       Impact factor: 5.568

4.  Evaluation of the performance of the automated NucliSENS easyMAG and EasyQ systems versus the Roche AmpliPrep-AMPLICOR combination for high-throughput monitoring of human immunodeficiency virus load.

Authors:  W Stevens; P Horsfield; L E Scott
Journal:  J Clin Microbiol       Date:  2007-01-31       Impact factor: 5.948

Review 5.  Advances in developing HIV-1 viral load assays for resource-limited settings.

Authors:  ShuQi Wang; Feng Xu; Utkan Demirci
Journal:  Biotechnol Adv       Date:  2010-07-01       Impact factor: 14.227

6.  Evaluation of the Abbott m2000rt RealTime HIV-1 assay with manual sample preparation compared with the ROCHE COBAS AmpliPrep/AMPLICOR HIV-1 MONITOR v1.5 using specimens from East Africa.

Authors:  John A Crump; Lesley E Scott; Emma Msuya; Anne B Morrissey; Ekyafyose E Kimaro; John F Shao; Wendy S Stevens
Journal:  J Virol Methods       Date:  2009-09-01       Impact factor: 2.014

7.  Generation of HIV-1 and Internal Control Transcripts as Standards for an In-House Quantitative Competitive RT-PCR Assay to Determine HIV-1 Viral Load.

Authors:  Anny Armas Cayarga; Yenitse Perea Hernández; Yaimé J González González; Santiago Dueñas Carrera; Idania González Pérez; René Robaina Álvarez
Journal:  Biotechnol Res Int       Date:  2011-06-23

Review 8.  Current practices in laboratory monitoring of HIV infection.

Authors:  Madhu Vajpayee; Teena Mohan
Journal:  Indian J Med Res       Date:  2011-12       Impact factor: 2.375

Review 9.  HIV-1 viral load assays for resource-limited settings.

Authors:  Susan A Fiscus; Ben Cheng; Suzanne M Crowe; Lisa Demeter; Cheryl Jennings; Veronica Miller; Richard Respess; Wendy Stevens
Journal:  PLoS Med       Date:  2006-10       Impact factor: 11.069

  9 in total

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