Literature DB >> 15951490

Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance.

Peter Geigenberger1, Babette Regierer, Adriano Nunes-Nesi, Andrea Leisse, Ewa Urbanczyk-Wochniak, Franziska Springer, Joost T van Dongen, Jens Kossmann, Alisdair R Fernie.   

Abstract

Pyrimidine nucleotides are of general importance for many aspects of cell function, but their role in the regulation of biosynthetic processes is still unclear. In this study, we investigate the influence of a decreased expression of UMP synthase (UMPS), a key enzyme in the pathway of de novo pyrimidine synthesis, on biosynthetic processes in growing potato (Solanum tuberosum) tubers. Transgenic plants were generated expressing UMPS in the antisense orientation under the control of the tuber-specific patatin promoter. Lines were selected with markedly decreased expression of UMPS in the tubers. Decreased expression of UMPS restricted the use of externally supplied orotate for de novo pyrimidine synthesis in tuber tissue, whereas the uridine-salvaging pathway was stimulated. This shift in the pathways of UMP synthesis was accompanied by increased levels of tuber uridine nucleotides, increased fluxes of [(14)C]sucrose to starch and cell wall synthesis, and increased amounts of starch and cell wall components in the tubers, whereas there were no changes in uridine nucleotide levels in leaves. Decreased expression of UMPS in tubers led to an increase in transcript levels of carbamoylphosphate synthase, uridine kinase, and uracil phosphoribosyltransferase, the latter two encoding enzymes in the pyrimidine salvage pathways. Thus, the results show that antisense inhibition of the de novo pathway of pyrimidine synthesis leads to a compensatory stimulation of the less energy-consuming salvage pathways, probably via increased expression and activity of uridine kinase and uracil phosphoribosyltransferase. This results in increased uridine nucleotide pool levels in tubers and improved biosynthetic performance.

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Year:  2005        PMID: 15951490      PMCID: PMC1167553          DOI: 10.1105/tpc.105.033548

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  36 in total

1.  Effects of phosphate limitation on expression of genes involved in pyrimidine synthesis and salvaging in Arabidopsis.

Authors:  Matthew M Hewitt; Jessica M Carr; Cynthia L Williamson; Robert D Slocum
Journal:  Plant Physiol Biochem       Date:  2005-02       Impact factor: 4.270

Review 2.  Uracil metabolism--UMP synthesis from orotic acid or uridine and conversion of uracil to beta-alanine: enzymes and cDNAs.

Authors:  T W Traut; M E Jones
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1996

3.  Diurnal changes in sucrose, nucleotides, starch synthesis and AGPS transcript in growing potato tubers that are suppressed by decreased expression of sucrose phosphate synthase.

Authors:  P Geigenberger; M Stitt
Journal:  Plant J       Date:  2000-09       Impact factor: 6.417

4.  Improved method for the isolation of RNA from plant tissues.

Authors:  J Logemann; J Schell; L Willmitzer
Journal:  Anal Biochem       Date:  1987-05-15       Impact factor: 3.365

5.  Carbon partitioning to cellulose synthesis.

Authors:  C H Haigler; M Ivanova-Datcheva; P S Hogan; V V Salnikov; S Hwang; K Martin; D P Delmer
Journal:  Plant Mol Biol       Date:  2001-09       Impact factor: 4.076

6.  Haplopappus gracilis cell strains resistant to pyrimidine analogues.

Authors:  G E Jones; J Hann
Journal:  Theor Appl Genet       Date:  1979-03       Impact factor: 5.699

7.  The contribution of plastidial phosphoglucomutase to the control of starch synthesis within the potato tuber.

Authors:  A R Fernie; U Roessner; R N Trethewey; L Willmitzer
Journal:  Planta       Date:  2001-07       Impact factor: 4.116

8.  Isolation and Characterization of UMP Synthase Mutants from Haploid Cell Suspensions of Nicotiana tabacum.

Authors:  D Santoso; R W Thornburg
Journal:  Plant Physiol       Date:  1992-07       Impact factor: 8.340

9.  Overexpression of pyrophosphatase leads to increased sucrose degradation and starch synthesis, increased activities of enzymes for sucrose-starch interconversions, and increased levels of nucleotides in growing potato tubers.

Authors:  P Geigenberger; M Hajirezaei; M Geiger; U Deiting; U Sonnewald; M Stitt
Journal:  Planta       Date:  1998-07       Impact factor: 4.116

10.  Alterations in pyrimidine nucleotide metabolism as an early signal during the execution of programmed cell death in tobacco BY-2 cells.

Authors:  Claudio Stasolla; Natalia Loukanina; Edward C Yeung; Trevor A Thorpe
Journal:  J Exp Bot       Date:  2004-09-10       Impact factor: 6.992

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  25 in total

1.  Uridine ribohydrolase and the balance between nucleotide degradation and salvage.

Authors:  Jennifer Mach
Journal:  Plant Cell       Date:  2009-03-17       Impact factor: 11.277

2.  Pyrimidine Salvage: Physiological Functions and Interaction with Chloroplast Biogenesis.

Authors:  Lisa Ohler; Sandra Niopek-Witz; Samuel E Mainguet; Torsten Möhlmann
Journal:  Plant Physiol       Date:  2019-05-17       Impact factor: 8.340

3.  Osmosensitive changes of carbohydrate metabolism in response to cellulose biosynthesis inhibition.

Authors:  Alexandra Wormit; Salman M Butt; Issariya Chairam; Joseph F McKenna; Adriano Nunes-Nesi; Lars Kjaer; Kerry O'Donnelly; Alisdair R Fernie; Rüdiger Woscholski; M C Laura Barter; Thorsten Hamann
Journal:  Plant Physiol       Date:  2012-03-15       Impact factor: 8.340

4.  Malate plays a crucial role in starch metabolism, ripening, and soluble solid content of tomato fruit and affects postharvest softening.

Authors:  Danilo C Centeno; Sonia Osorio; Adriano Nunes-Nesi; Ana L F Bertolo; Raphael T Carneiro; Wagner L Araújo; Marie-Caroline Steinhauser; Justyna Michalska; Johannes Rohrmann; Peter Geigenberger; Sandra N Oliver; Mark Stitt; Fernando Carrari; Jocelyn K C Rose; Alisdair R Fernie
Journal:  Plant Cell       Date:  2011-01-14       Impact factor: 11.277

5.  Functional characterization of a gene encoding a dual domain for uridine kinase and uracil phosphoribosyltransferase in Arabidopsis thaliana.

Authors:  M Rafiqul Islam; Hoyeun Kim; Shin-Wook Kang; Jung-Sup Kim; Young-Min Jeong; Hyun-Ju Hwang; So-Young Lee; Je-Chang Woo; Sang-Gu Kim
Journal:  Plant Mol Biol       Date:  2007-03       Impact factor: 4.076

Review 6.  Synchronization of developmental, molecular and metabolic aspects of source-sink interactions.

Authors:  Alisdair R Fernie; Christian W B Bachem; Yrjö Helariutta; H Ekkehard Neuhaus; Salomé Prat; Yong-Ling Ruan; Mark Stitt; Lee J Sweetlove; Mechthild Tegeder; Vanessa Wahl; Sophia Sonnewald; Uwe Sonnewald
Journal:  Nat Plants       Date:  2020-02-10       Impact factor: 15.793

7.  Alteration of the interconversion of pyruvate and malate in the plastid or cytosol of ripening tomato fruit invokes diverse consequences on sugar but similar effects on cellular organic acid, metabolism, and transitory starch accumulation.

Authors:  Sonia Osorio; José G Vallarino; Marek Szecowka; Shai Ufaz; Vered Tzin; Ruthie Angelovici; Gad Galili; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

8.  Uridine-ribohydrolase is a key regulator in the uridine degradation pathway of Arabidopsis.

Authors:  Benjamin Jung; Martin Flörchinger; Hans-Henning Kunz; Michaela Traub; Ruth Wartenberg; Wolfgang Jeblick; H Ekkehard Neuhaus; Torsten Möhlmann
Journal:  Plant Cell       Date:  2009-03-17       Impact factor: 11.277

9.  Decreasing the mitochondrial synthesis of malate in potato tubers does not affect plastidial starch synthesis, suggesting that the physiological regulation of ADPglucose pyrophosphorylase is context dependent.

Authors:  Marek Szecowka; Sonia Osorio; Toshihiro Obata; Wagner L Araújo; Johannes Rohrmann; Adriano Nunes-Nesi; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2012-10-12       Impact factor: 8.340

10.  Altered carbohydrate metabolism in the storage roots of sweet potato plants overexpressing the SRF1 gene, which encodes a Dof zinc finger transcription factor.

Authors:  Masaru Tanaka; Yasuhiro Takahata; Hiroki Nakayama; Makoto Nakatani; Makoto Tahara
Journal:  Planta       Date:  2009-07-19       Impact factor: 4.116

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