Literature DB >> 15944695

Structure of the cross-beta spine of amyloid-like fibrils.

Rebecca Nelson1, Michael R Sawaya, Melinda Balbirnie, Anders Ø Madsen, Christian Riekel, Robert Grothe, David Eisenberg.   

Abstract

Numerous soluble proteins convert to insoluble amyloid-like fibrils that have common properties. Amyloid fibrils are associated with fatal diseases such as Alzheimer's, and amyloid-like fibrils can be formed in vitro. For the yeast protein Sup35, conversion to amyloid-like fibrils is associated with a transmissible infection akin to that caused by mammalian prions. A seven-residue peptide segment from Sup35 forms amyloid-like fibrils and closely related microcrystals, from which we have determined the atomic structure of the cross-beta spine. It is a double beta-sheet, with each sheet formed from parallel segments stacked in register. Side chains protruding from the two sheets form a dry, tightly self-complementing steric zipper, bonding the sheets. Within each sheet, every segment is bound to its two neighbouring segments through stacks of both backbone and side-chain hydrogen bonds. The structure illuminates the stability of amyloid fibrils, their self-seeding characteristic and their tendency to form polymorphic structures.

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Year:  2005        PMID: 15944695      PMCID: PMC1479801          DOI: 10.1038/nature03680

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  44 in total

1.  The behaviour of polyamino acids reveals an inverse side chain effect in amyloid structure formation.

Authors:  Marcus Fändrich; Christopher M Dobson
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

2.  Conformational variations in an infectious protein determine prion strain differences.

Authors:  Motomasa Tanaka; Peter Chien; Nariman Naber; Roger Cooke; Jonathan S Weissman
Journal:  Nature       Date:  2004-03-18       Impact factor: 49.962

3.  beta-Helix is a likely core structure of yeast prion Sup35 amyloid fibers.

Authors:  Aiko Kishimoto; Kazuya Hasegawa; Hirofumi Suzuki; Hideki Taguchi; Keiichi Namba; Masasuke Yoshida
Journal:  Biochem Biophys Res Commun       Date:  2004-03-12       Impact factor: 3.575

4.  Molecular conformation of a peptide fragment of transthyretin in an amyloid fibril.

Authors:  Christopher P Jaroniec; Cait E MacPhee; Nathan S Astrof; Christopher M Dobson; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-12       Impact factor: 11.205

5.  Common core structure of amyloid fibrils by synchrotron X-ray diffraction.

Authors:  M Sunde; L C Serpell; M Bartlam; P E Fraser; M B Pepys; C C Blake
Journal:  J Mol Biol       Date:  1997-10-31       Impact factor: 5.469

6.  "Cross-beta" conformation in proteins.

Authors:  A J Geddes; K D Parker; E D Atkins; E Beighton
Journal:  J Mol Biol       Date:  1968-03-14       Impact factor: 5.469

7.  X-ray diffraction studies on amyloid filaments.

Authors:  E D Eanes; G G Glenner
Journal:  J Histochem Cytochem       Date:  1968-11       Impact factor: 2.479

8.  Amyloid fibers are water-filled nanotubes.

Authors:  M F Perutz; J T Finch; J Berriman; A Lesk
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

9.  Glutamine repeats as polar zippers: their possible role in inherited neurodegenerative diseases.

Authors:  M F Perutz; T Johnson; M Suzuki; J T Finch
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

10.  Protein-only transmission of three yeast prion strains.

Authors:  Chih-Yen King; Ruben Diaz-Avalos
Journal:  Nature       Date:  2004-03-18       Impact factor: 49.962

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  703 in total

1.  Dynamic nuclear polarization-enhanced solid-state NMR spectroscopy of GNNQQNY nanocrystals and amyloid fibrils.

Authors:  Galia T Debelouchina; Marvin J Bayro; Patrick C A van der Wel; Marc A Caporini; Alexander B Barnes; Melanie Rosay; Werner E Maas; Robert G Griffin
Journal:  Phys Chem Chem Phys       Date:  2010-05-08       Impact factor: 3.676

2.  Mutations that replace aromatic side chains promote aggregation of the Alzheimer's Aβ peptide.

Authors:  Anne H Armstrong; Jermont Chen; Angela Fortner McKoy; Michael H Hecht
Journal:  Biochemistry       Date:  2011-04-22       Impact factor: 3.162

3.  Atomic view of a toxic amyloid small oligomer.

Authors:  Arthur Laganowsky; Cong Liu; Michael R Sawaya; Julian P Whitelegge; Jiyong Park; Minglei Zhao; Anna Pensalfini; Angela B Soriaga; Meytal Landau; Poh K Teng; Duilio Cascio; Charles Glabe; David Eisenberg
Journal:  Science       Date:  2012-03-09       Impact factor: 47.728

4.  How type II diabetes-related islet amyloid polypeptide damages lipid bilayers.

Authors:  Chang-Chun Lee; Yen Sun; Huey W Huang
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

5.  Antiparallel β-sheet architecture in Iowa-mutant β-amyloid fibrils.

Authors:  Wei Qiang; Wai-Ming Yau; Yongquan Luo; Mark P Mattson; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-08       Impact factor: 11.205

Review 6.  Inhibition of protein misfolding and aggregation by natural phenolic compounds.

Authors:  Zohra Dhouafli; Karina Cuanalo-Contreras; El Akrem Hayouni; Charles E Mays; Claudio Soto; Ines Moreno-Gonzalez
Journal:  Cell Mol Life Sci       Date:  2018-07-20       Impact factor: 9.261

7.  A new artificial beta-sheet that dimerizes through parallel beta-sheet interactions.

Authors:  Sergiy Levin; James S Nowick
Journal:  Org Lett       Date:  2009-02-19       Impact factor: 6.005

Review 8.  Getting a grip on prions: oligomers, amyloids, and pathological membrane interactions.

Authors:  Byron Caughey; Gerald S Baron; Bruce Chesebro; Martin Jeffrey
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

Review 9.  Prion diseases and their biochemical mechanisms.

Authors:  Nathan J Cobb; Witold K Surewicz
Journal:  Biochemistry       Date:  2009-03-31       Impact factor: 3.162

10.  Differentiating amino acid residues and side chain orientations in peptides using scanning tunneling microscopy.

Authors:  Shelley A Claridge; John C Thomas; Miles A Silverman; Jeffrey J Schwartz; Yanlian Yang; Chen Wang; Paul S Weiss
Journal:  J Am Chem Soc       Date:  2013-12-02       Impact factor: 15.419

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