Literature DB >> 15936897

Metagenomics: advances in ecology and biotechnology.

Helen L Steele1, Wolfgang R Streit.   

Abstract

This review highlights the significant advances which have been made in prokaryotic ecology and biotechnology due to the application of metagenomic techniques. It is now possible to link processes to specific microorganisms in the environment, such as the detection of a new phototrophic process in marine bacteria, and to characterise the metabolic cooperation which takes place in mixed species biofilms. The range of prokaryote derived products available for biotechnology applications is increasing rapidly. The knowledge gained from analysis of biosynthetic pathways provides valuable information about enzymology and allows engineering of biocatalysts for specific processes. The expansion of metagenomic techniques to include alternative heterologous hosts for gene expression and the development of sophisticated assays which enable screening of thousands of clones offers the possibility to find out even more valuable information about the prokaryotic world.

Mesh:

Year:  2005        PMID: 15936897     DOI: 10.1016/j.femsle.2005.05.011

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  19 in total

1.  Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil.

Authors:  Kyong-Cheol Ko; Soon-Ok Rim; Yunjon Han; Bong Seok Shin; Geun-Joong Kim; Jong Hyun Choi; Jae Jun Song
Journal:  J Ind Microbiol Biotechnol       Date:  2012-01-24       Impact factor: 3.346

2.  MEGAN analysis of metagenomic data.

Authors:  Daniel H Huson; Alexander F Auch; Ji Qi; Stephan C Schuster
Journal:  Genome Res       Date:  2007-01-25       Impact factor: 9.043

3.  Assessing the viability of bacterial species in drinking water by combined cellular and molecular analyses.

Authors:  Leila Kahlisch; Karsten Henne; Lothar Gröbe; Ingrid Brettar; Manfred G Höfle
Journal:  Microb Ecol       Date:  2011-08-16       Impact factor: 4.552

4.  Census-based rapid and accurate metagenome taxonomic profiling.

Authors:  Amirhossein Shamsaddini; Yang Pan; W Evan Johnson; Konstantinos Krampis; Mariya Shcheglovitova; Vahan Simonyan; Amy Zanne; Raja Mazumder
Journal:  BMC Genomics       Date:  2014-10-21       Impact factor: 3.969

5.  Isolation and biochemical characterization of two novel metagenome-derived esterases.

Authors:  C Elend; C Schmeisser; C Leggewie; P Babiak; J D Carballeira; H L Steele; J-L Reymond; K-E Jaeger; W R Streit
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

6.  Characterization and its potential application of two esterases derived from the arctic sediment metagenome.

Authors:  Jeong Ho Jeon; Jun-Tae Kim; Sung Gyun Kang; Jung-Hyun Lee; Sang-Jin Kim
Journal:  Mar Biotechnol (NY)       Date:  2008-09-24       Impact factor: 3.619

7.  Isolation of cold-active, acidic endocellulase from Ladakh soil by functional metagenomics.

Authors:  Archana Bhat; Syed Riyaz-Ul-Hassan; Nasier Ahmad; Nidhi Srivastava; Sarojini Johri
Journal:  Extremophiles       Date:  2013-01-26       Impact factor: 2.395

8.  Morphological and genetic characterization of endophytic bacteria isolated from roots of different maize genotypes.

Authors:  Angela Cristina Ikeda; Luciana Lange Bassani; Douglas Adamoski; Danyelle Stringari; Vanessa Kava Cordeiro; Chirlei Glienke; Maria Berenice Reynaud Steffens; Mariangela Hungria; Lygia Vitoria Galli-Terasawa
Journal:  Microb Ecol       Date:  2012-09-06       Impact factor: 4.552

Review 9.  Molecular approaches: advantages and artifacts in assessing bacterial diversity.

Authors:  Daniela Santos Pontes; Cláudia Iracema Lima-Bittencourt; Edmar Chartone-Souza; Andréa Maria Amaral Nascimento
Journal:  J Ind Microbiol Biotechnol       Date:  2007-05-03       Impact factor: 4.258

10.  Novel lipolytic enzymes identified from metagenomic library of deep-sea sediment.

Authors:  Jeong Ho Jeon; Jun Tae Kim; Hyun Sook Lee; Sang-Jin Kim; Sung Gyun Kang; Sang Ho Choi; Jung-Hyun Lee
Journal:  Evid Based Complement Alternat Med       Date:  2011-08-07       Impact factor: 2.629

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.