Literature DB >> 15935693

Cloning, expression, and catalytic triad of recombinant arylformamidase.

Michael K Pabarcus1, John E Casida.   

Abstract

Arylformamidase (AFMID) is the second enzyme of the kynurenine pathway metabolizing tryptophan to nicotinic acid and nicotinamide adenine dinucleotide cofactors. Inhibition of AFMID by organophosphorus insecticides in developing chicken embryos is correlated with lowered NAD levels and severe teratogenesis. The cDNA sequence previously identified for mouse liver AFMID (AF399717) (MW 34229) was cloned and expressed in Escherichia coli. Residues identified as potential catalytic triad members (S162, D247, and H279) through sequence motif and homology modeling were mutated to alanine to probe their contributions to enzyme activity. The wild-type and mutant AFMIDs were expressed as amino terminal 6 x His-tagged recombinant proteins to facilitate purification. Three chromatography steps isolated highly purified proteins for enzyme activity comparisons. Expressed AFMID showed high activity, 42+/-1 micromol/min/mg protein, for its natural substrate, N-formyl-l-kynurenine. The same K(m) (0.18--0.19 mM) was observed for expressed and native cytosolic AFMID. The single mutants (S162A, D247A, and H279A) lost essentially all (>99%) activity. The predicted catalytic triad of S162, D247, and H279 is therefore confirmed by site-directed mutagenesis.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15935693     DOI: 10.1016/j.pep.2005.04.013

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  10 in total

Review 1.  The metabolic serine hydrolases and their functions in mammalian physiology and disease.

Authors:  Jonathan Z Long; Benjamin F Cravatt
Journal:  Chem Rev       Date:  2011-06-23       Impact factor: 60.622

2.  A mathematical model of tryptophan metabolism via the kynurenine pathway provides insights into the effects of vitamin B-6 deficiency, tryptophan loading, and induction of tryptophan 2,3-dioxygenase on tryptophan metabolites.

Authors:  Luisa Rios-Avila; H Frederik Nijhout; Michael C Reed; Harry S Sitren; Jesse F Gregory
Journal:  J Nutr       Date:  2013-07-31       Impact factor: 4.798

3.  Nmag_2608, an extracellular ubiquitin-like domain-containing protein from the haloalkaliphilic archaeon Natrialba magadii.

Authors:  María Victoria Ordóñez; Débora Nercessian; Rubén Danilo Conde
Journal:  Extremophiles       Date:  2012-04-10       Impact factor: 2.395

4.  Biochemical identification and crystal structure of kynurenine formamidase from Drosophila melanogaster.

Authors:  Qian Han; Howard Robinson; Jianyong Li
Journal:  Biochem J       Date:  2012-09-01       Impact factor: 3.857

5.  The Oncogenic PI3K-Induced Transcriptomic Landscape Reveals Key Functions in Splicing and Gene Expression Regulation.

Authors:  Erik Ladewig; Flavia Michelini; Komal Jhaveri; Pau Castel; Javier Carmona; Lauren Fairchild; Adler G Zuniga; Amaia Arruabarrena-Aristorena; Emiliano Cocco; Ryan Blawski; Srushti Kittane; Yuhan Zhang; Mirna Sallaku; Laura Baldino; Vasilis Hristidis; Sarat Chandarlapaty; Omar Abdel-Wahab; Christina Leslie; Maurizio Scaltriti; Eneda Toska
Journal:  Cancer Res       Date:  2022-06-15       Impact factor: 13.312

6.  Loss of arylformamidase with reduced thymidine kinase expression leads to impaired glucose tolerance.

Authors:  Alison J Hugill; Michelle E Stewart; Marianne A Yon; Fay Probert; I Jane Cox; Tertius A Hough; Cheryl L Scudamore; Liz Bentley; Gary Wall; Sara E Wells; Roger D Cox
Journal:  Biol Open       Date:  2015-10-02       Impact factor: 2.422

7.  Metagenomic mining for thermostable esterolytic enzymes uncovers a new family of bacterial esterases.

Authors:  Dimitra Zarafeta; Danai Moschidi; Efthymios Ladoukakis; Sergey Gavrilov; Evangelia D Chrysina; Aristotelis Chatziioannou; Ilya Kublanov; Georgios Skretas; Fragiskos N Kolisis
Journal:  Sci Rep       Date:  2016-12-19       Impact factor: 4.379

8.  A human-specific switch of alternatively spliced AFMID isoforms contributes to TP53 mutations and tumor recurrence in hepatocellular carcinoma.

Authors:  Kuan-Ting Lin; Wai Kit Ma; Juergen Scharner; Yun-Ru Liu; Adrian R Krainer
Journal:  Genome Res       Date:  2018-02-15       Impact factor: 9.043

Review 9.  Kynurenine Pathway of Tryptophan Metabolism: Regulatory and Functional Aspects.

Authors:  Abdulla A-B Badawy
Journal:  Int J Tryptophan Res       Date:  2017-03-15

10.  Plasma protein profiling reveals candidate biomarkers for multiple sclerosis treatment.

Authors:  Sahl Khalid Bedri; Ola B Nilsson; Katharina Fink; Anna Månberg; Carl Hamsten; Burcu Ayoglu; Ali Manouchehrinia; Peter Nilsson; Tomas Olsson; Jan Hillert; Hans Grönlund; Anna Glaser
Journal:  PLoS One       Date:  2019-05-29       Impact factor: 3.240

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.