Literature DB >> 15908582

Measuring fast dynamics in solutions and cells with a laser scanning microscope.

Michelle A Digman1, Claire M Brown, Parijat Sengupta, Paul W Wiseman, Alan R Horwitz, Enrico Gratton.   

Abstract

Single-point fluorescence correlation spectroscopy (FCS) allows measurements of fast diffusion and dynamic processes in the microsecond-to-millisecond time range. For measurements on living cells, image correlation spectroscopy (ICS) and temporal ICS extend the FCS approach to diffusion times as long as seconds to minutes and simultaneously provide spatially resolved dynamic information. However, ICS is limited to very slow dynamics due to the frame acquisition rate. Here we develop novel extensions to ICS that probe spatial correlations in previously inaccessible temporal windows. We show that using standard laser confocal imaging techniques (raster-scan mode) not only can we reach the temporal scales of single-point FCS, but also have the advantages of ICS in providing spatial information. This novel method, called raster image correlation spectroscopy (RICS), rapidly measures during the scan many focal points within the cell providing the same concentration and dynamic information of FCS as well as information on the spatial correlation between points along the scanning path. Longer time dynamics are recovered from the information in successive lines and frames. We exploit the hidden time structure of the scan method in which adjacent pixels are a few microseconds apart thereby accurately measuring dynamic processes such as molecular diffusion in the microseconds-to-seconds timescale. In conjunction with simulated data, we show that a wide range of diffusion coefficients and concentrations can be measured by RICS. We used RICS to determine for the first time spatially resolved diffusions of paxillin-EGFP stably expressed in CHOK1 cells. This new type of data analysis has a broad application in biology and it provides a powerful tool for measuring fast as well as slower dynamic processes in cellular systems using any standard laser confocal microscope.

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Year:  2005        PMID: 15908582      PMCID: PMC1366616          DOI: 10.1529/biophysj.105.062836

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  12 in total

1.  Analysis of membrane protein cluster densities and sizes in situ by image correlation spectroscopy.

Authors:  N O Petersen; C Brown; A Kaminski; J Rocheleau; M Srivastava; P W Wiseman
Journal:  Faraday Discuss       Date:  1998       Impact factor: 4.008

Review 2.  Illuminating single molecules in condensed matter.

Authors:  W E Moerner; M Orrit
Journal:  Science       Date:  1999-03-12       Impact factor: 47.728

Review 3.  Fluorescence spectroscopy of single biomolecules.

Authors:  S Weiss
Journal:  Science       Date:  1999-03-12       Impact factor: 47.728

4.  Two-photon image correlation spectroscopy and image cross-correlation spectroscopy.

Authors:  P W Wiseman; J A Squier; M H Ellisman; K R Wilson
Journal:  J Microsc       Date:  2000-10       Impact factor: 1.758

Review 5.  Cell migration: integrating signals from front to back.

Authors:  Anne J Ridley; Martin A Schwartz; Keith Burridge; Richard A Firtel; Mark H Ginsberg; Gary Borisy; J Thomas Parsons; Alan Rick Horwitz
Journal:  Science       Date:  2003-12-05       Impact factor: 47.728

6.  Cellular characterization of adenylate kinase and its isoform: two-photon excitation fluorescence imaging and fluorescence correlation spectroscopy.

Authors:  Qiaoqiao Ruan; Yan Chen; Enrico Gratton; Michael Glaser; William W Mantulin
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

7.  Spatial mapping of integrin interactions and dynamics during cell migration by image correlation microscopy.

Authors:  Paul W Wiseman; Claire M Brown; Donna J Webb; Benedict Hebert; Natalie L Johnson; Jeff A Squier; Mark H Ellisman; A F Horwitz
Journal:  J Cell Sci       Date:  2004-10-12       Impact factor: 5.285

8.  Fluctuation correlation spectroscopy with a laser-scanning microscope: exploiting the hidden time structure.

Authors:  Michelle A Digman; Parijat Sengupta; Paul W Wiseman; Claire M Brown; Alan R Horwitz; Enrico Gratton
Journal:  Biophys J       Date:  2005-03-25       Impact factor: 4.033

9.  Two-photon fluorescence correlation spectroscopy: method and application to the intracellular environment.

Authors:  K M Berland; P T So; E Gratton
Journal:  Biophys J       Date:  1995-02       Impact factor: 4.033

10.  Scanning two-photon fluctuation correlation spectroscopy: particle counting measurements for detection of molecular aggregation.

Authors:  K M Berland; P T So; Y Chen; W W Mantulin; E Gratton
Journal:  Biophys J       Date:  1996-07       Impact factor: 4.033

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  193 in total

1.  Measuring and interpreting point spread functions to determine confocal microscope resolution and ensure quality control.

Authors:  Richard W Cole; Tushare Jinadasa; Claire M Brown
Journal:  Nat Protoc       Date:  2011-11-10       Impact factor: 13.491

2.  Dynamics of CENP-N kinetochore binding during the cell cycle.

Authors:  Daniela Hellwig; Stephan Emmerth; Tobias Ulbricht; Volker Döring; Christian Hoischen; Ronny Martin; Catarina P Samora; Andrew D McAinsh; Christopher W Carroll; Aaron F Straight; Patrick Meraldi; Stephan Diekmann
Journal:  J Cell Sci       Date:  2011-11-18       Impact factor: 5.285

3.  Measurement of distance with the nanoscale precise imaging by rapid beam oscillation method.

Authors:  Luca Lanzano; Enrico Gratton
Journal:  Microsc Res Tech       Date:  2012-04-19       Impact factor: 2.769

4.  Quantification of fluorophore copy number from intrinsic fluctuations during fluorescence photobleaching.

Authors:  Chitra R Nayak; Andrew D Rutenberg
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

5.  Development of time-integrated multipoint moment analysis for spatially resolved fluctuation spectroscopy with high time resolution.

Authors:  Doogie Oh; Alexandra Zidovska; Yangqing Xu; Daniel J Needleman
Journal:  Biophys J       Date:  2011-09-20       Impact factor: 4.033

6.  Dissecting chromatin interactions in living cells from protein mobility maps.

Authors:  Fabian Erdel; Katharina Müller-Ott; Michael Baum; Malte Wachsmuth; Karsten Rippe
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

Review 7.  Fluorescence-based transient state monitoring for biomolecular spectroscopy and imaging.

Authors:  Jerker Widengren
Journal:  J R Soc Interface       Date:  2010-04-07       Impact factor: 4.118

8.  Paxillin dynamics measured during adhesion assembly and disassembly by correlation spectroscopy.

Authors:  Michelle A Digman; Claire M Brown; Alan R Horwitz; William W Mantulin; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

9.  Phase fluctuations on the micron-submicron scale in GUVs composed of a binary lipid mixture.

Authors:  Anna Celli; Sabrina Beretta; Enrico Gratton
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

10.  Spatiotemporal Analysis of K-Ras Plasma Membrane Interactions Reveals Multiple High Order Homo-oligomeric Complexes.

Authors:  Suparna Sarkar-Banerjee; Abdallah Sayyed-Ahmad; Priyanka Prakash; Kwang-Jin Cho; M Neal Waxham; John F Hancock; Alemayehu A Gorfe
Journal:  J Am Chem Soc       Date:  2017-09-18       Impact factor: 15.419

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