Literature DB >> 15901707

Analysis of transient polyhydroxybutyrate production in Wautersia eutropha H16 by quantitative Western analysis and transmission electron microscopy.

Jiamin Tian1, Aimin He, Adam G Lawrence, Pinghua Liu, Nicki Watson, Anthony J Sinskey, Joanne Stubbe.   

Abstract

Polyhydroxybutyrates (PHBs) are polyoxoesters generated from (R)3-hydroxybutyryl coenzyme A by PHB synthase. During the polymerization reaction, the polymers undergo a phase transition and generate granules. Wautersia eutropha can transiently accumulate PHB when it is grown in a nutrient-rich medium (up to 23% of the cell dry weight in dextrose-free tryptic soy broth [TSB]). PHB homeostasis under these growth conditions was examined by quantitative Western analysis to monitor the proteins present, their levels, and changes in their levels over a 48-h growth period. The proteins examined include PhaC (the synthase), PhaP (a phasin), PhaR (a transcription factor), and PhaZ1(a), PhaZ1(b), and PhaZ1(c) (putative intracellular depolymerases), as well as PhaZ2 (a hydroxybutyrate oligomer hydrolase). The results show that PhaC and PhaZ1(a) were present simultaneously. No PhaZ1(b) or PhaZ1(c) was detected at any time throughout growth. PhaZ2 was observed and exhibited an expression pattern different from that of PhaZ1(a). The levels of PhaP changed dramatically and corresponded kinetically to the levels of PHB. Transmission electron microscopy (TEM) provided the dimensions of the average cell and the average granule at 4 h and 24 h of growth (J. Tian, A. J. Sinskey, and J. Stubbe, J. Bacteriol. 187:3814-3824, 2005). This information allowed us to calculate the amount of each protein and number of granules per cell and the granule surface coverage by proteins. The molecular mass of PHB (10(6) Da) was determined by dynamic light scattering at 4 h, the time of maximum PHB accumulation. At this time, the surface area of the granules was maximally covered with PhaP (27 to 54%), and there were one or two PhaP molecules/PHB chain. The ratio of PHB chains to PhaC was approximately 60, which required reinitiation of polymer formation on PhaC. The TEM studies of wild-type and deltaphaR strains in TSB provided further support for an alternative mechanism of granule formation.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15901707      PMCID: PMC1112050          DOI: 10.1128/JB.187.11.3825-3832.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  21 in total

1.  STRUCTURE OF POLY-BETA-HYDROXYBUTYRIC ACID GRANULES.

Authors:  D G LUNDGREN; R M PFISTER; J M MERRICK
Journal:  J Gen Microbiol       Date:  1964-03

2.  Preliminary analysis of polyhydroxyalkanoate inclusions using atomic force microscopy.

Authors:  Douglas Dennis; Caroline Liebig; Tara Holley; Kara S Thomas; Amit Khosla; Douglas Wilson; Brian Augustine
Journal:  FEMS Microbiol Lett       Date:  2003-09-12       Impact factor: 2.742

3.  Accumulation of the PhaP phasin of Ralstonia eutropha is dependent on production of polyhydroxybutyrate in cells.

Authors:  G M York; B H Junker; J A Stubbe; A J Sinskey
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

4.  The "free" lipids of two different strains of hydrogen-oxidizing bacteria in relation to their growth phases.

Authors:  O W Thiele; J Dreysel; D Hermann
Journal:  Eur J Biochem       Date:  1972-09-18

5.  Morphology of poly-beta-hydroxybutyrate granules.

Authors:  D Ellar; D G Lundgren; K Okamura; R H Marchessault
Journal:  J Mol Biol       Date:  1968-08-14       Impact factor: 5.469

Review 6.  Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates.

Authors:  A J Anderson; E A Dawes
Journal:  Microbiol Rev       Date:  1990-12

Review 7.  Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic.

Authors:  L L Madison; G W Huisman
Journal:  Microbiol Mol Biol Rev       Date:  1999-03       Impact factor: 11.056

8.  Regulation of phasin expression and polyhydroxyalkanoate (PHA) granule formation in Ralstonia eutropha H16.

Authors:  Markus Pötter; Mohamed H Madkour; Frank Mayer; Alexander Steinbüchel
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

9.  Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes.

Authors:  Gregory M York; Joachim Lupberger; Jiamin Tian; Adam G Lawrence; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

10.  OBSERVATIONS ON THE FINE STRUCTURE OF SPHEROPLASTS OF RHODOSPIRILLUM RUBRUM.

Authors:  E S BOATMAN
Journal:  J Cell Biol       Date:  1964-02       Impact factor: 10.539

View more
  20 in total

1.  Mutations derived from the thermophilic polyhydroxyalkanoate synthase PhaC enhance the thermostability and activity of PhaC from Cupriavidus necator H16.

Authors:  Der-Shyan Sheu; Wen-Ming Chen; Yung-Wei Lai; Rey-Chang Chang
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

2.  Preparation of poly(3-hydroxybutyrate-co-hydroxyvalerate) films from halophilic archaea and their potential use in drug delivery.

Authors:  Ozkan Danis; Ayse Ogan; Pınar Tatlican; Azade Attar; Emrah Cakmakci; Bulent Mertoglu; Meral Birbir
Journal:  Extremophiles       Date:  2015-02-08       Impact factor: 2.395

Review 3.  Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes).

Authors:  Dieter Jendrossek
Journal:  J Bacteriol       Date:  2009-03-06       Impact factor: 3.490

4.  Purification of polyhydroxybutyrate synthase from its native organism, Ralstonia eutropha: implications for the initiation and elongation of polymer formation in vivo.

Authors:  Mimi Cho; Christopher J Brigham; Anthony J Sinskey; JoAnne Stubbe
Journal:  Biochemistry       Date:  2012-03-07       Impact factor: 3.162

5.  Structure of the Catalytic Domain of the Class I Polyhydroxybutyrate Synthase from Cupriavidus necator.

Authors:  Elizabeth C Wittenborn; Marco Jost; Yifeng Wei; JoAnne Stubbe; Catherine L Drennan
Journal:  J Biol Chem       Date:  2016-10-14       Impact factor: 5.157

6.  A novel DNA-binding protein, PhaR, plays a central role in the regulation of polyhydroxyalkanoate accumulation and granule formation in the haloarchaeon Haloferax mediterranei.

Authors:  Shuangfeng Cai; Lei Cai; Dahe Zhao; Guiming Liu; Jing Han; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

7.  Kinetic studies of polyhydroxybutyrate granule formation in Wautersia eutropha H16 by transmission electron microscopy.

Authors:  Jiamin Tian; Anthony J Sinskey; Joanne Stubbe
Journal:  J Bacteriol       Date:  2005-06       Impact factor: 3.490

8.  PhaP is involved in the formation of a network on the surface of polyhydroxyalkanoate inclusions in Cupriavidus necator H16.

Authors:  Douglas Dennis; Vicki Sein; Edgar Martinez; Brian Augustine
Journal:  J Bacteriol       Date:  2007-11-02       Impact factor: 3.490

9.  PhaM is the physiological activator of poly(3-hydroxybutyrate) (PHB) synthase (PhaC1) in Ralstonia eutropha.

Authors:  Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

10.  Localization of poly(3-hydroxybutyrate) (PHB) granule-associated proteins during PHB granule formation and identification of two new phasins, PhaP6 and PhaP7, in Ralstonia eutropha H16.

Authors:  Daniel Pfeiffer; Dieter Jendrossek
Journal:  J Bacteriol       Date:  2012-08-24       Impact factor: 3.490

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.