Literature DB >> 22923598

Localization of poly(3-hydroxybutyrate) (PHB) granule-associated proteins during PHB granule formation and identification of two new phasins, PhaP6 and PhaP7, in Ralstonia eutropha H16.

Daniel Pfeiffer1, Dieter Jendrossek.   

Abstract

Poly(3-hydroxybutyrate) (PHB) granules are covered by a surface layer consisting of mainly phasins and other PHB granule-associated proteins (PGAPs). Phasins are small amphiphilic proteins that determine the number and size of accumulated PHB granules. Five phasin proteins (PhaP1 to PhaP5) are known for Ralstonia eutropha. In this study, we identified three additional potential phasin genes (H16_B1988, H16_B2296, and H16_B2326) by inspection of the R. eutropha genome for sequences with "phasin 2 motifs." To determine whether the corresponding proteins represent true PGAPs, fusions with eYFP (enhanced yellow fluorescent protein) were constructed. Similar fusions of eYFP with PhaP1 to PhaP5 as well as fusions with PHB synthase (PhaC1), an inactive PhaC1 variant (PhaC1-C319A), and PhaC2 were also made. All fusions were investigated in wild-type and PHB-negative backgrounds. Colocalization with PHB granules was found for all PhaC variants and for PhaP1 to PhaP5. Additionally, eYFP fusions with H16_B1988 and H16_B2326 colocalized with PHB. Fusions of H16_B2296 with eYFP, however, did not colocalize with PHB granules but did colocalize with the nucleoid region. Notably, all fusions (except H16_B2296) were soluble in a ΔphaC1 strain. These data confirm that H16_B1988 and H16_B2326 but not H16_B2296 encode true PGAPs, for which we propose the designation PhaP6 (H16_B1988) and PhaP7 (H16_B2326). When localization of phasins was investigated at different stages of PHB accumulation, fusions of PhaP6 and PhaP7 were soluble in the first 3 h under PHB-permissive conditions, although PHB granules appeared after 10 min. At later time points, the fusions colocalized with PHB. Remarkably, PHB granules of strains expressing eYFP fusions with PhaP5, PhaP6, or PhaP7 localized predominantly near the cell poles or in the area of future septum formation. This phenomenon was not observed for the other PGAPs (PhaP1 to PhaP4, PhaC1, PhaC1-C319A, and PhaC2) and indicated that some phasins can have additional functions. A chromosomal deletion of phaP6 or phaP7 had no visible effect on formation of PHB granules.

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Year:  2012        PMID: 22923598      PMCID: PMC3486113          DOI: 10.1128/JB.00779-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  51 in total

1.  Class I and III polyhydroxyalkanoate synthases from Ralstonia eutropha and Allochromatium vinosum: characterization and substrate specificity studies.

Authors:  W Yuan; Y Jia; J Tian; K D Snell; U Müh; A J Sinskey; R H Lambalot; C T Walsh; J Stubbe
Journal:  Arch Biochem Biophys       Date:  2001-10-01       Impact factor: 4.013

Review 2.  A microbial polyhydroxyalkanoates (PHA) based bio- and materials industry.

Authors:  Guo-Qiang Chen
Journal:  Chem Soc Rev       Date:  2009-05-08       Impact factor: 54.564

3.  Genome-wide transcriptome analyses of the 'Knallgas' bacterium Ralstonia eutropha H16 with regard to polyhydroxyalkanoate metabolism.

Authors:  Katja Peplinski; Armin Ehrenreich; Christina Döring; Mechthild Bömeke; Frank Reinecke; Carmen Hutmacher; Alexander Steinbüchel
Journal:  Microbiology       Date:  2010-04-15       Impact factor: 2.777

4.  The isolation of mutants not accumulating poly-beta-hydroxybutyric acid.

Authors:  H G Schlegel; R Lafferty; I Krauss
Journal:  Arch Mikrobiol       Date:  1970

5.  Fluorescence microscopical investigation of poly(3-hydroxybutyrate) granule formation in bacteria.

Authors:  Dieter Jendrossek
Journal:  Biomacromolecules       Date:  2005 Mar-Apr       Impact factor: 6.988

6.  Bacterial synthesis of PHA block copolymers.

Authors:  Erik N Pederson; Christopher W J McChalicher; Friedrich Srienc
Journal:  Biomacromolecules       Date:  2006-06       Impact factor: 6.988

7.  Wide distribution among halophilic archaea of a novel polyhydroxyalkanoate synthase subtype with homology to bacterial type III synthases.

Authors:  Jing Han; Jing Hou; Hailong Liu; Shuangfeng Cai; Bo Feng; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2010-10-01       Impact factor: 4.792

8.  Solubilization of active green fluorescent protein from insoluble particles by guanidine and arginine.

Authors:  Kouhei Tsumoto; Mitsuo Umetsu; Izumi Kumagai; Daisuke Ejima; Tsutomu Arakawa
Journal:  Biochem Biophys Res Commun       Date:  2003-12-26       Impact factor: 3.575

Review 9.  Bacterial polyhydroxyalkanoate granules: biogenesis, structure, and potential use as nano-/micro-beads in biotechnological and biomedical applications.

Authors:  Katrin Grage; Anika C Jahns; Natalie Parlane; Rajasekaran Palanisamy; Indira A Rasiah; Jane A Atwood; Bernd H A Rehm
Journal:  Biomacromolecules       Date:  2009-04-13       Impact factor: 6.988

10.  Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes.

Authors:  Gregory M York; Joachim Lupberger; Jiamin Tian; Adam G Lawrence; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

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  33 in total

1.  Development of a transferable bimolecular fluorescence complementation system for the investigation of interactions between poly(3-hydroxybutyrate) granule-associated proteins in Gram-negative bacteria.

Authors:  Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2013-02-22       Impact factor: 4.792

2.  Comparative proteome analysis reveals four novel polyhydroxybutyrate (PHB) granule-associated proteins in Ralstonia eutropha H16.

Authors:  Anna Sznajder; Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

Review 3.  Genome characteristics dictate poly-R-(3)-hydroxyalkanoate production in Cupriavidus necator H16.

Authors:  Gurusamy Kutralam-Muniasamy; Fermín Peréz-Guevara
Journal:  World J Microbiol Biotechnol       Date:  2018-05-24       Impact factor: 3.312

4.  Investigation on the Evolutionary Relation of Diverse Polyhydroxyalkanoate Gene Clusters in Betaproteobacteria.

Authors:  Gurusamy Kutralam-Muniasamy; Rodolfo Marsch; Fermín Pérez-Guevara
Journal:  J Mol Evol       Date:  2018-07-31       Impact factor: 2.395

5.  To be or not to be a poly(3-hydroxybutyrate) (PHB) depolymerase: PhaZd1 (PhaZ6) and PhaZd2 (PhaZ7) of Ralstonia eutropha, highly active PHB depolymerases with no detectable role in mobilization of accumulated PHB.

Authors:  Anna Sznajder; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2014-06-06       Impact factor: 4.792

6.  Poly(3-Hydroxybutyrate) (PHB) Polymerase PhaC1 and PHB Depolymerase PhaZa1 of Ralstonia eutropha Are Phosphorylated In Vivo.

Authors:  Janina R Juengert; Cameron Patterson; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2018-06-18       Impact factor: 4.792

7.  Photoautotrophic Polyhydroxybutyrate Granule Formation Is Regulated by Cyanobacterial Phasin PhaP in Synechocystis sp. Strain PCC 6803.

Authors:  Waldemar Hauf; Björn Watzer; Nora Roos; Alexander Klotz; Karl Forchhammer
Journal:  Appl Environ Microbiol       Date:  2015-04-24       Impact factor: 4.792

8.  Coordinated Regulation of the Size and Number of Polyhydroxybutyrate Granules by Core and Accessory Phasins in the Facultative Microsymbiont Sinorhizobium fredii NGR234.

Authors:  Yan-Wei Sun; Yan Li; Yue Hu; Wen-Xin Chen; Chang-Fu Tian
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

9.  PhaM is the physiological activator of poly(3-hydroxybutyrate) (PHB) synthase (PhaC1) in Ralstonia eutropha.

Authors:  Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

10.  Formation of polyphosphate by polyphosphate kinases and its relationship to poly(3-hydroxybutyrate) accumulation in Ralstonia eutropha strain H16.

Authors:  Tony Tumlirsch; Anna Sznajder; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2015-09-25       Impact factor: 4.792

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