Literature DB >> 15901706

Kinetic studies of polyhydroxybutyrate granule formation in Wautersia eutropha H16 by transmission electron microscopy.

Jiamin Tian1, Anthony J Sinskey, Joanne Stubbe.   

Abstract

Wautersia eutropha, formerly known as Ralstonia eutropha, a gram-negative bacterium, accumulates polyhydroxybutyrate (PHB) as insoluble granules inside the cell when nutrients other than carbon are limited. In this paper, we report findings from kinetic studies of granule formation and degradation in W. eutropha H16 obtained using transmission electron microscopy (TEM). In nitrogen-limited growth medium, the phenotype of the cells at the early stages of granule formation was revealed for the first time. At the center of the cells, dark-stained "mediation elements" with small granules attached were observed. These mediation elements are proposed to serve as nucleation sites for granule initiation. TEM images also revealed that when W. eutropha cells were introduced into nitrogen-limited medium from nutrient-rich medium, the cell size increased two- to threefold, and the cells underwent additional volume changes during growth. Unbiased stereology was used to analyze the two-dimensional TEM images, from which the average volume of a W. eutropha H16 cell and the total surface area of granules per cell in nutrient-rich and PHB production media were obtained. These parameters were essential in the calculation of the concentration of proteins involved in PHB formation and utilization and their changes with time. The extent of protein coverage of the granule surface area is presented in the accompanying paper.

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Year:  2005        PMID: 15901706      PMCID: PMC1112049          DOI: 10.1128/JB.187.11.3814-3824.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  26 in total

1.  Cloning of an intracellular Poly[D(-)-3-Hydroxybutyrate] depolymerase gene from Ralstonia eutropha H16 and characterization of the gene product.

Authors:  H Saegusa; M Shiraki; C Kanai; T Saito
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

2.  Preliminary analysis of polyhydroxyalkanoate inclusions using atomic force microscopy.

Authors:  Douglas Dennis; Caroline Liebig; Tara Holley; Kara S Thomas; Amit Khosla; Douglas Wilson; Brian Augustine
Journal:  FEMS Microbiol Lett       Date:  2003-09-12       Impact factor: 2.742

3.  The Ralstonia eutropha PhaR protein couples synthesis of the PhaP phasin to the presence of polyhydroxybutyrate in cells and promotes polyhydroxybutyrate production.

Authors:  Gregory M York; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

Review 4.  Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates.

Authors:  A J Anderson; E A Dawes
Journal:  Microbiol Rev       Date:  1990-12

5.  Detection of intermediates from the polymerization reaction catalyzed by a D302A mutant of class III polyhydroxyalkanoate (PHA) synthase.

Authors:  Jiamin Tian; Anthony J Sinskey; JoAnne Stubbe
Journal:  Biochemistry       Date:  2005-02-08       Impact factor: 3.162

6.  Regulation of phasin expression and polyhydroxyalkanoate (PHA) granule formation in Ralstonia eutropha H16.

Authors:  Markus Pötter; Mohamed H Madkour; Frank Mayer; Alexander Steinbüchel
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

7.  Purification and properties of an intracellular 3-hydroxybutyrate-oligomer hydrolase (PhaZ2) in Ralstonia eutropha H16 and its identification as a novel intracellular poly(3-hydroxybutyrate) depolymerase.

Authors:  Teruyuki Kobayashi; Mari Shiraki; Tomoko Abe; Akinori Sugiyama; Terumi Saito
Journal:  J Bacteriol       Date:  2003-06       Impact factor: 3.490

8.  Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes.

Authors:  Gregory M York; Joachim Lupberger; Jiamin Tian; Adam G Lawrence; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

9.  A repressor protein, PhaR, regulates polyhydroxyalkanoate (PHA) synthesis via its direct interaction with PHA.

Authors:  Akira Maehara; Seiichi Taguchi; Tatsuaki Nishiyama; Tsuneo Yamane; Yoshiharu Doi
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

10.  OBSERVATIONS ON THE FINE STRUCTURE OF SPHEROPLASTS OF RHODOSPIRILLUM RUBRUM.

Authors:  E S BOATMAN
Journal:  J Cell Biol       Date:  1964-02       Impact factor: 10.539

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  31 in total

1.  Engineering bacteria to manufacture functionalized polyester beads.

Authors:  Jenny L Draper; Bernd H Rehm
Journal:  Bioengineered       Date:  2012-06-18       Impact factor: 3.269

2.  Roles of multiple acetoacetyl coenzyme A reductases in polyhydroxybutyrate biosynthesis in Ralstonia eutropha H16.

Authors:  Charles F Budde; Alison E Mahan; Jingnan Lu; Chokyun Rha; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

Review 3.  Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes).

Authors:  Dieter Jendrossek
Journal:  J Bacteriol       Date:  2009-03-06       Impact factor: 3.490

4.  Identification and characterization of a novel intracellular poly(3-hydroxybutyrate) depolymerase from Bacillus megaterium.

Authors:  Hui-Ju Chen; Shih-Chuan Pan; Gwo-Chyuan Shaw
Journal:  Appl Environ Microbiol       Date:  2009-06-26       Impact factor: 4.792

5.  Comparative proteome analysis reveals four novel polyhydroxybutyrate (PHB) granule-associated proteins in Ralstonia eutropha H16.

Authors:  Anna Sznajder; Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

6.  Purification of polyhydroxybutyrate synthase from its native organism, Ralstonia eutropha: implications for the initiation and elongation of polymer formation in vivo.

Authors:  Mimi Cho; Christopher J Brigham; Anthony J Sinskey; JoAnne Stubbe
Journal:  Biochemistry       Date:  2012-03-07       Impact factor: 3.162

7.  Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei.

Authors:  Shuangfeng Cai; Lei Cai; Hailong Liu; Xiaoqing Liu; Jing Han; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2012-01-13       Impact factor: 4.792

8.  A novel DNA-binding protein, PhaR, plays a central role in the regulation of polyhydroxyalkanoate accumulation and granule formation in the haloarchaeon Haloferax mediterranei.

Authors:  Shuangfeng Cai; Lei Cai; Dahe Zhao; Guiming Liu; Jing Han; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

9.  PhaP is involved in the formation of a network on the surface of polyhydroxyalkanoate inclusions in Cupriavidus necator H16.

Authors:  Douglas Dennis; Vicki Sein; Edgar Martinez; Brian Augustine
Journal:  J Bacteriol       Date:  2007-11-02       Impact factor: 3.490

10.  PhaM is the physiological activator of poly(3-hydroxybutyrate) (PHB) synthase (PhaC1) in Ralstonia eutropha.

Authors:  Daniel Pfeiffer; Dieter Jendrossek
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

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