Literature DB >> 15897200

The oligomeric T4 primase is the functional form during replication.

Jingsong Yang1, Jun Xi, Zhihao Zhuang, Stephen J Benkovic.   

Abstract

Replisome DNA primases are responsible for the synthesis of short RNA primers required for the initiation of repetitive Okazaki fragment synthesis on the lagging strand during DNA replication. In bacteriophage T4, the primase (gp61) interacts with the helicase (gp41) to form the primosome complex, an interaction that greatly stimulates the priming activity of gp61. Because gp41 is hexameric, a question arises as to whether gp61 also forms a hexameric structure during replication. Several results from this study support such a structure. Titration of the primase/single-stranded DNA binding followed by fluorescence anisotropy implicated a 6:1 stoichiometry. The observed rate constant, k(cat), for priming was found to increase with the primase concentration, implicating an oligomeric form of the primase as the major functional species. The generation of hetero-oligomeric populations of the hexameric primase by controlled mixing of wild type and an inactive mutant primase confirmed the oligomeric nature of the most active primase form. Mutant primases defective in either the N- or C-terminal domains and catalytically inactive could be mixed to create oligomeric primases with restored catalytic activity suggesting an active site shared between subunits. Collectively, these results provide strong evidence for the functional oligomerization of gp61. The potential roles of gp61 oligomerization during lagging strand synthesis are discussed.

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Year:  2005        PMID: 15897200     DOI: 10.1074/jbc.M501847200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  16 in total

1.  Insights into Okazaki fragment synthesis by the T4 replisome: the fate of lagging-strand holoenzyme components and their influence on Okazaki fragment size.

Authors:  Danqi Chen; Hongjun Yue; Michelle M Spiering; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2013-05-31       Impact factor: 5.157

Review 2.  Single-molecule studies of DNA replisome function.

Authors:  Senthil K Perumal; Hongjun Yue; Zhenxin Hu; Michelle M Spiering; Stephen J Benkovic
Journal:  Biochim Biophys Acta       Date:  2009-08-07

3.  RNA primer handoff in bacteriophage T4 DNA replication: the role of single-stranded DNA-binding protein and polymerase accessory proteins.

Authors:  Scott W Nelson; Ravindra Kumar; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2008-05-28       Impact factor: 5.157

4.  Assembly and subunit stoichiometry of the functional helicase-primase (primosome) complex of bacteriophage T4.

Authors:  Davis Jose; Steven E Weitzel; Debra Jing; Peter H von Hippel
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

Review 5.  Understanding DNA replication by the bacteriophage T4 replisome.

Authors:  Stephen J Benkovic; Michelle M Spiering
Journal:  J Biol Chem       Date:  2017-09-25       Impact factor: 5.157

Review 6.  Dynamic coupling between the motors of DNA replication: hexameric helicase, DNA polymerase, and primase.

Authors:  Smita S Patel; Manjula Pandey; Divya Nandakumar
Journal:  Curr Opin Chem Biol       Date:  2011-08-22       Impact factor: 8.822

7.  Class-specific restrictions define primase interactions with DNA template and replicative helicase.

Authors:  Marilynn A Larson; Mark A Griep; Rafael Bressani; Kiran Chintakayala; Panos Soultanas; Steven H Hinrichs
Journal:  Nucleic Acids Res       Date:  2010-06-30       Impact factor: 16.971

8.  Replisome Dynamics during Chromosome Duplication.

Authors:  Isabel Kurth; Mike O'Donnell
Journal:  EcoSal Plus       Date:  2009-08

Review 9.  Mechanism and evolution of DNA primases.

Authors:  Robert D Kuchta; Gudrun Stengel
Journal:  Biochim Biophys Acta       Date:  2009-06-21

10.  Coupling DNA unwinding activity with primer synthesis in the bacteriophage T4 primosome.

Authors:  Maria Manosas; Michelle M Spiering; Zhihao Zhuang; Stephen J Benkovic; Vincent Croquette
Journal:  Nat Chem Biol       Date:  2009-10-18       Impact factor: 15.040

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