Literature DB >> 15894541

Yeast mRNA Poly(A) tail length control can be reconstituted in vitro in the absence of Pab1p-dependent Poly(A) nuclease activity.

Sonia Dheur1, Keith R Nykamp, Nicolas Viphakone, Maurice S Swanson, Lionel Minvielle-Sebastia.   

Abstract

Regulation of poly(A) tail length during mRNA 3'-end formation requires a specific poly(A)-binding protein in addition to the cleavage/polyadenylation machinery. The mechanism that controls polyadenylation in mammals is well understood and involves the nuclear poly(A)-binding protein PABPN1. In contrast, poly(A) tail length regulation is poorly understood in yeast. Previous studies have suggested that the major cytoplasmic poly(A)-binding protein Pab1p acts as a length control factor in conjunction with the Pab1p-dependent poly(A) nuclease PAN, to regulate poly(A) tail length in an mRNA specific manner. In contrast, we recently showed that Nab2p regulates polyadenylation during de novo synthesis, and its nuclear location is more consistent with a role in 3'-end processing than that of cytoplasmic Pab1p. Here, we investigate whether PAN activity is required for de novo poly(A) tail synthesis. Components required for mRNA 3'-end formation were purified from wild-type and pan mutant cells. In both situations, 3'-end formation could be reconstituted whether Nab2p or Pab1p was used as the poly(A) tail length control factor. However, polyadenylation was more efficient and physiologically more relevant in the presence of Nab2p as opposed to Pab1p. Moreover, cell immunofluorescence studies confirmed that PAN subunits are localized in the cytoplasm which suggests that cytoplasmic Pab1p and PAN may act at a later stage in mRNA metabolism. Based on these findings, we propose that Nab2p is necessary and sufficient to regulate poly(A) tail length during de novo synthesis in yeast.

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Year:  2005        PMID: 15894541     DOI: 10.1074/jbc.M504720200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  19 in total

Review 1.  The multitasking polyA tail: nuclear RNA maturation, degradation and export.

Authors:  Agnieszka Tudek; Marta Lloret-Llinares; Torben Heick Jensen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

2.  PAB1 self-association precludes its binding to poly(A), thereby accelerating CCR4 deadenylation in vivo.

Authors:  Gang Yao; Yueh-Chin Chiang; Chongxu Zhang; Darren J Lee; Thomas M Laue; Clyde L Denis
Journal:  Mol Cell Biol       Date:  2007-07-09       Impact factor: 4.272

3.  Structure of yeast poly(A) polymerase in complex with a peptide from Fip1, an intrinsically disordered protein.

Authors:  Gretchen Meinke; Chukwudi Ezeokonkwo; Paul Balbo; Walter Stafford; Claire Moore; Andrew Bohm
Journal:  Biochemistry       Date:  2008-06-07       Impact factor: 3.162

4.  Tpa1p is part of an mRNP complex that influences translation termination, mRNA deadenylation, and mRNA turnover in Saccharomyces cerevisiae.

Authors:  Kim M Keeling; Joe Salas-Marco; Lev Z Osherovich; David M Bedwell
Journal:  Mol Cell Biol       Date:  2006-07       Impact factor: 4.272

5.  Rrp6p controls mRNA poly(A) tail length and its decoration with poly(A) binding proteins.

Authors:  Manfred Schmid; Mathias Bach Poulsen; Pawel Olszewski; Vicent Pelechano; Cyril Saguez; Ishaan Gupta; Lars M Steinmetz; Claire Moore; Torben Heick Jensen
Journal:  Mol Cell       Date:  2012-06-07       Impact factor: 17.970

Review 6.  The long and the short of it: the role of the zinc finger polyadenosine RNA binding protein, Nab2, in control of poly(A) tail length.

Authors:  Sharon Soucek; Anita H Corbett; Milo B Fasken
Journal:  Biochim Biophys Acta       Date:  2012-03-28

7.  Reconstitution of CF IA from overexpressed subunits reveals stoichiometry and provides insights into molecular topology.

Authors:  James M B Gordon; Sergei Shikov; Jason N Kuehner; Melissa Liriano; Eunhee Lee; Walter Stafford; Mathias Bach Poulsen; Celia Harrison; Claire Moore; Andrew Bohm
Journal:  Biochemistry       Date:  2011-11-02       Impact factor: 3.162

8.  Recognition of polyadenosine RNA by the zinc finger domain of nuclear poly(A) RNA-binding protein 2 (Nab2) is required for correct mRNA 3'-end formation.

Authors:  Seth M Kelly; Sara W Leung; Luciano H Apponi; Anna M Bramley; Elizabeth J Tran; Julia A Chekanova; Susan R Wente; Anita H Corbett
Journal:  J Biol Chem       Date:  2010-06-16       Impact factor: 5.157

9.  Assembly of an export-competent mRNP is needed for efficient release of the 3'-end processing complex after polyadenylation.

Authors:  Xiangping Qu; Søren Lykke-Andersen; Tommy Nasser; Cyril Saguez; Edouard Bertrand; Torben Heick Jensen; Claire Moore
Journal:  Mol Cell Biol       Date:  2009-07-27       Impact factor: 4.272

10.  Regulation of NAB2 mRNA 3'-end formation requires the core exosome and the Trf4p component of the TRAMP complex.

Authors:  Kelly M Roth; Joel Byam; Feng Fang; J Scott Butler
Journal:  RNA       Date:  2009-04-15       Impact factor: 4.942

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