Literature DB >> 15893732

Negative control contributes to an extensive program of meiotic splicing in fission yeast.

Nicole Averbeck1, Sham Sunder, Nicole Sample, Jo Ann Wise, Janet Leatherwood.   

Abstract

Despite a high frequency of introns in the fission yeast Schizosaccharomyces pombe, regulated splicing is virtually unknown. We present evidence that splicing constitutes a major mechanism for controlling gene expression during meiosis, as 12 of 96 transcripts tested, which encode known components as well as previously uncharacterized ORFs, retain introns until specific times during differentiation. The meiotically spliced pre-mRNAs include two cyclins, rem1 (discovered by Ayte and Nurse) and crs1. Consistent with the use of regulated splicing to block protein production, expression of crs1 in vegetative cells is toxic. Analyses of gene chimeras indicate that splicing is prevented in mitotically growing cells via inhibition, in contrast to the positive control of meiotic splicing in budding yeast. Most strikingly, splicing of crs1 and rem1 is regulated by sequences located outside the coding regions, far from the target introns, a phenomenon previously observed only in metazoans.

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Year:  2005        PMID: 15893732     DOI: 10.1016/j.molcel.2005.04.007

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  36 in total

1.  Comparative functional genomics of the fission yeasts.

Authors:  Nicholas Rhind; Zehua Chen; Moran Yassour; Dawn A Thompson; Brian J Haas; Naomi Habib; Ilan Wapinski; Sushmita Roy; Michael F Lin; David I Heiman; Sarah K Young; Kanji Furuya; Yabin Guo; Alison Pidoux; Huei Mei Chen; Barbara Robbertse; Jonathan M Goldberg; Keita Aoki; Elizabeth H Bayne; Aaron M Berlin; Christopher A Desjardins; Edward Dobbs; Livio Dukaj; Lin Fan; Michael G FitzGerald; Courtney French; Sharvari Gujja; Klavs Hansen; Dan Keifenheim; Joshua Z Levin; Rebecca A Mosher; Carolin A Müller; Jenna Pfiffner; Margaret Priest; Carsten Russ; Agata Smialowska; Peter Swoboda; Sean M Sykes; Matthew Vaughn; Sonya Vengrova; Ryan Yoder; Qiandong Zeng; Robin Allshire; David Baulcombe; Bruce W Birren; William Brown; Karl Ekwall; Manolis Kellis; Janet Leatherwood; Henry Levin; Hanah Margalit; Rob Martienssen; Conrad A Nieduszynski; Joseph W Spatafora; Nir Friedman; Jacob Z Dalgaard; Peter Baumann; Hironori Niki; Aviv Regev; Chad Nusbaum
Journal:  Science       Date:  2011-04-21       Impact factor: 47.728

2.  A dominant role for meiosis-specific 3' RNA processing in controlling expression of a fission yeast cyclin gene.

Authors:  Kristine Potter; Nicole Cremona; Sham Sunder; Jo Ann Wise
Journal:  RNA       Date:  2012-05-30       Impact factor: 4.942

3.  Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention.

Authors:  Karen Yap; Zhao Qin Lim; Piyush Khandelia; Brad Friedman; Eugene V Makeyev
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

4.  Negative regulation of meiotic gene expression by the nuclear poly(a)-binding protein in fission yeast.

Authors:  Olivier St-André; Caroline Lemieux; Audrey Perreault; Daniel H Lackner; Jürg Bähler; François Bachand
Journal:  J Biol Chem       Date:  2010-07-09       Impact factor: 5.157

Review 5.  Molecular mechanisms underlying the mitosis-meiosis decision.

Authors:  Yuriko Harigaya; Masayuki Yamamoto
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

6.  Spo5/Mug12, a putative meiosis-specific RNA-binding protein, is essential for meiotic progression and forms Mei2 dot-like nuclear foci.

Authors:  Takashi Kasama; Akira Shigehisa; Aiko Hirata; Takamune T Saito; Takahiro Tougan; Daisuke Okuzaki; Hiroshi Nojima
Journal:  Eukaryot Cell       Date:  2006-08

7.  At the (3') end, you'll turn to meiosis.

Authors:  Alberto Moldón; José Ayté
Journal:  Nat Struct Mol Biol       Date:  2009-04       Impact factor: 15.369

8.  A large-scale screen in S. pombe identifies seven novel genes required for critical meiotic events.

Authors:  Cristina Martín-Castellanos; Miguel Blanco; Ana E Rozalén; Livia Pérez-Hidalgo; Ana I García; Francisco Conde; Juan Mata; Chad Ellermeier; Luther Davis; Pedro San-Segundo; Gerald R Smith; Sergio Moreno
Journal:  Curr Biol       Date:  2005-11-22       Impact factor: 10.834

9.  BS69/ZMYND11 reads and connects histone H3.3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing.

Authors:  Rui Guo; Lijuan Zheng; Juw Won Park; Ruitu Lv; Hao Chen; Fangfang Jiao; Wenqi Xu; Shirong Mu; Hong Wen; Jinsong Qiu; Zhentian Wang; Pengyuan Yang; Feizhen Wu; Jingyi Hui; Xiangdong Fu; Xiaobing Shi; Yujiang Geno Shi; Yi Xing; Fei Lan; Yang Shi
Journal:  Mol Cell       Date:  2014-09-25       Impact factor: 17.970

10.  Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance.

Authors:  Nathan N Lee; Venkata R Chalamcharla; Francisca Reyes-Turcu; Sameet Mehta; Martin Zofall; Vanivilasini Balachandran; Jothy Dhakshnamoorthy; Nitika Taneja; Soichiro Yamanaka; Ming Zhou; Shiv I S Grewal
Journal:  Cell       Date:  2013-11-07       Impact factor: 41.582

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