Literature DB >> 15884070

Proteins in action monitored by time-resolved FTIR spectroscopy.

Carsten Kötting1, Klaus Gerwert.   

Abstract

In the post genome era proteins coming into the focus of life sciences. X-ray structure analysis and NMR spectroscopy are established methods to determine the geometry of proteins. In order to determine the molecular reaction mechanism of proteins, time-resolved FTIR (trFTIR) difference spectroscopy emerges as a valuable tool. In this Minireview we describe the trFTIR difference spectroscopy and show its application on the light-driven proton pump bacteriorhodopsin (bR), the photosynthetic reaction center and the GTPase Ras, which is crucial in signal transduction. The main principles of the technique are presented, including a summary of triggering techniques, scan modes and analysis.

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Year:  2005        PMID: 15884070     DOI: 10.1002/cphc.200400504

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  24 in total

1.  Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system.

Authors:  Minoru Kubo; Satoru Nakashima; Satoru Yamaguchi; Takashi Ogura; Masao Mochizuki; Jiyoung Kang; Masaru Tateno; Kyoko Shinzawa-Itoh; Koji Kato; Shinya Yoshikawa
Journal:  J Biol Chem       Date:  2013-08-30       Impact factor: 5.157

2.  A time-resolved vibrational spectroscopy glimpse into the oxygen-evolving complex of photosynthesis.

Authors:  Terry M Bricker
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-01       Impact factor: 11.205

3.  An intrinsically disordered photosystem II subunit, PsbO, provides a structural template and a sensor of the hydrogen-bonding network in photosynthetic water oxidation.

Authors:  Adam R Offenbacher; Brandon C Polander; Bridgette A Barry
Journal:  J Biol Chem       Date:  2013-08-12       Impact factor: 5.157

Review 4.  Fourier transform infrared (FTIR) spectroscopy.

Authors:  Catherine Berthomieu; Rainer Hienerwadel
Journal:  Photosynth Res       Date:  2009-06-10       Impact factor: 3.573

5.  Kinetic and vibrational isotope effects of proton transfer reactions in channelrhodopsin-2.

Authors:  Tom Resler; Bernd-Joachim Schultz; Víctor A Lórenz-Fonfría; Ramona Schlesinger; Joachim Heberle
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

6.  Fourier-transform infrared study of the photoactivation process of Xenopus (6-4) photolyase.

Authors:  Daichi Yamada; Yu Zhang; Tatsuya Iwata; Kenichi Hitomi; Elizabeth D Getzoff; Hideki Kandori
Journal:  Biochemistry       Date:  2012-07-13       Impact factor: 3.162

Review 7.  Time-resolved infrared spectroscopy in the study of photosynthetic systems.

Authors:  Alberto Mezzetti; Winfried Leibl
Journal:  Photosynth Res       Date:  2016-09-27       Impact factor: 3.573

8.  Protein Dynamics of the Sensor Protein HemAT as Probed by Time-Resolved Step-Scan FTIR Spectroscopy.

Authors:  Andrea Pavlou; Hideaki Yoshimura; Shigetoshi Aono; Eftychia Pinakoulaki
Journal:  Biophys J       Date:  2018-02-06       Impact factor: 4.033

Review 9.  Mechanism divergence in microbial rhodopsins.

Authors:  John L Spudich; Oleg A Sineshchekov; Elena G Govorunova
Journal:  Biochim Biophys Acta       Date:  2013-07-03

10.  Hydrogen bond switching among flavin and amino acid side chains in the BLUF photoreceptor observed by ultrafast infrared spectroscopy.

Authors:  Cosimo Bonetti; Tilo Mathes; Ivo H M van Stokkum; Katharine M Mullen; Marie-Louise Groot; Rienk van Grondelle; Peter Hegemann; John T M Kennis
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

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