Literature DB >> 15879274

Pedobacter caeni sp. nov., a novel species isolated from a nitrifying inoculum.

Bram Vanparys1, Kim Heylen1, Liesbeth Lebbe1, Paul De Vos1.   

Abstract

A Gram-negative, rod-shaped, non-spore-forming bacterium was isolated from a nitrifying inoculum. On the basis of 16S rRNA gene sequence similarity, LMG 22862(T) was shown to belong to the family Sphingobacteriaceae, related to Pedobacter africanus (98.0 %) and Pedobacter heparinus (97.6 %). The results of 16S rRNA gene sequence analysis, DNA-DNA hybridization, SDS-PAGE, analysis of the fatty acid composition and physiological and biochemical tests allowed genotypic and phenotypic differentiation of LMG 22862(T) from Pedobacter species with validly published names. LMG 22862(T) therefore represents a novel species within this genus, for which the name Pedobacter caeni sp. nov. is proposed, with the type strain LMG 22862(T) (=DSM 16990(T)).

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Year:  2005        PMID： 15879274     DOI： 10.1099/ijs.0.63635-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN： 1466-5026            Impact factor:   2.747


  7 in total

1.  DNA-SIP Reveals the Diversity of Chemolithoautotrophic Bacteria Inhabiting Three Different Soil Types in Typical Karst Rocky Desertification Ecosystems in Southwest China.

Authors:  Baoqin Li; Zhe Li; Xiaoxu Sun; Qi Wang; Enzong Xiao; Weimin Sun
Journal:  Microb Ecol       Date:  2018-05-04       Impact factor: 4.552

2.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

3.  Genome sequence of Pedobacter arcticus sp. nov., a sea ice bacterium isolated from tundra soil.

Authors:  Ye Yin; Guidong Yue; Qiang Gao; Zhiyong Wang; Fang Peng; Chengxiang Fang; Xu Yang; Li Pan
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

4.  Bacterial diversity in Cr(VI) and Cr(III)-contaminated industrial wastewaters.

Authors:  Katerina Katsaveli; Dimitris Vayenas; George Tsiamis; Kostas Bourtzis
Journal:  Extremophiles       Date:  2012-01-19       Impact factor: 2.395

5.  Pararcticibacter amylolyticus gen. nov., sp. nov., Isolated from a Rotten Hemp Rope, and Reclassification of Pedobacter tournemirensis as Pararcticibacter tournemirensis comb. nov.

Authors:  Yu-Yuan Cai; Wei-Wei Dong; Yuan-Liang Hu; Xu Jiang; Yan-Wei Wang; Yi-Qing Zhou; Nan Peng; Yun-Xiang Liang; Shu-Miao Zhao
Journal:  Curr Microbiol       Date:  2019-12-06       Impact factor: 2.188

6.  Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113).

Authors:  Konstantinos Liolios; Johannes Sikorski; Meagan Lu; Matt Nolan; Alla Lapidus; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Marcel Huntemann; Natalia Ivanova; Ioanna Pagani; Konstantinos Mavromatis; Galina Ovchinikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Evelyne-Marie Brambilla; Oleg Kotsyurbenko; Manfred Rohde; Brian J Tindall; Birte Abt; Markus Göker; John C Detter; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2011-09-23

7.  Root-Associated Bacterial Community Shifts in Hydroponic Lettuce Cultured with Urine-Derived Fertilizer.

Authors:  Thijs Van Gerrewey; Christophe El-Nakhel; Stefania De Pascale; Jolien De Paepe; Peter Clauwaert; Frederiek-Maarten Kerckhof; Nico Boon; Danny Geelen
Journal:  Microorganisms       Date:  2021-06-18
  7 in total

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