Literature DB >> 15872182

The poly(A)-limiting element enhances mRNA accumulation by increasing the efficiency of pre-mRNA 3' processing.

Jing Peng1, Elizabeth L Murray, Daniel R Schoenberg.   

Abstract

The poly(A)-limiting element (PLE) is a conserved sequence originally found in the 3' UTR of Xenopus albumin mRNA whose presence restricts the length of the poly(A) tail on both pre-mRNA and fully processed mRNA to <20 nt. Results presented in this study show that the PLE also increases the cytoplasmic level of reporter beta-globin mRNA. Transcription run-on shows this increase was not due to increased reporter gene transcription, and experiments with tetracycline repressor-controlled reporter mRNA showed the PLE does not alter the rate of mRNA decay. Both RT-PCR and RNase protection assay showed the PLE caused a 50% increase in the 3' processing of reporter beta-globin mRNA in vivo. This was confirmed in vitro, where PLE-containing RNA was cleaved in HeLa nuclear extract at a rate 80% faster than a control RNA bearing an inactive element. These results indicate that the PLE regulates the length of the poly(A) tail and the efficiency of 3' processing. In addition, they show that PLE-containing mRNA with a <20-nt poly(A) tail is as stable as mRNA with a 100- to 200-nt poly(A) tail.

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Year:  2005        PMID: 15872182      PMCID: PMC1262677          DOI: 10.1261/rna.2020805

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  19 in total

Review 1.  The cap-to-tail guide to mRNA turnover.

Authors:  C J Wilusz; M Wormington; S W Peltz
Journal:  Nat Rev Mol Cell Biol       Date:  2001-04       Impact factor: 94.444

2.  Increased efficiency of mRNA 3' end formation: a new genetic mechanism contributing to hereditary thrombophilia.

Authors:  N H Gehring; U Frede; G Neu-Yilik; P Hundsdoerfer; B Vetter; M W Hentze; A E Kulozik
Journal:  Nat Genet       Date:  2001-08       Impact factor: 38.330

3.  Targeting an mRNA for decapping: displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs.

Authors:  S Tharun; R Parker
Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

4.  U2AF modulates poly(A) length control by the poly(A)-limiting element.

Authors:  Haidong Gu; Daniel R Schoenberg
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

5.  Decapping and decay of messenger RNA occur in cytoplasmic processing bodies.

Authors:  Ujwal Sheth; Roy Parker
Journal:  Science       Date:  2003-05-02       Impact factor: 47.728

6.  Purifying mRNAs with a high-affinity eIF4E mutant identifies the short 3' poly(A) end phenotype.

Authors:  Youkyung Hwang Choi; Curt H Hagedorn
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-30       Impact factor: 11.205

7.  mRNA with a <20-nt poly(A) tail imparted by the poly(A)-limiting element is translated as efficiently in vivo as long poly(A) mRNA.

Authors:  Jing Peng; Daniel R Schoenberg
Journal:  RNA       Date:  2005-05-31       Impact factor: 4.942

8.  Control of poly(A) polymerase level is essential to cytoplasmic polyadenylation and early development in Drosophila.

Authors:  François Juge; Sophie Zaessinger; Claudia Temme; Elmar Wahle; Martine Simonelig
Journal:  EMBO J       Date:  2002-12-02       Impact factor: 11.598

9.  Extranuclear estrogen-regulated destabilization of Xenopus laevis serum albumin mRNA.

Authors:  D R Schoenberg; J E Moskaitis; L H Smith; R L Pastori
Journal:  Mol Endocrinol       Date:  1989-05

Review 10.  A history of poly A sequences: from formation to factors to function.

Authors:  Mary Edmonds
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2002
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  5 in total

1.  Propagation of genetic variation in gene regulatory networks.

Authors:  Erik Plahte; Arne B Gjuvsland; Stig W Omholt
Journal:  Physica D       Date:  2013-08-01       Impact factor: 2.300

2.  3' end processing of a long nuclear-retained noncoding RNA yields a tRNA-like cytoplasmic RNA.

Authors:  Jeremy E Wilusz; Susan M Freier; David L Spector
Journal:  Cell       Date:  2008-11-28       Impact factor: 41.582

3.  mRNA with a <20-nt poly(A) tail imparted by the poly(A)-limiting element is translated as efficiently in vivo as long poly(A) mRNA.

Authors:  Jing Peng; Daniel R Schoenberg
Journal:  RNA       Date:  2005-05-31       Impact factor: 4.942

4.  Allele interaction--single locus genetics meets regulatory biology.

Authors:  Arne B Gjuvsland; Erik Plahte; Tormod Adnøy; Stig W Omholt
Journal:  PLoS One       Date:  2010-02-23       Impact factor: 3.240

5.  Nonlinear regulation enhances the phenotypic expression of trans-acting genetic polymorphisms.

Authors:  Arne B Gjuvsland; Ben J Hayes; Theo H E Meuwissen; Erik Plahte; Stig W Omholt
Journal:  BMC Syst Biol       Date:  2007-07-25
  5 in total

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