Literature DB >> 15846809

Automated analysis of meta-analysis networks.

Jack L Lancaster1, Angela R Laird, P Mickle Fox, David E Glahn, Peter T Fox.   

Abstract

The high information content in large data sets from voxel-based meta-analyses is complex, making it hard to readily resolve details. Using the meta-analysis network as a standardized data structure, network analysis algorithms can examine complex interrelationships and resolve hidden details. Two new network analysis algorithms have been adapted for use with meta-analysis networks. The first, called replicator dynamics network analysis (RDNA), analyzes co-occurrence of activations, whereas the second, called fractional similarity network analysis (FSNA), uses binary pattern matching to form similarity subnets. These two network analysis methods were evaluated using data from activation likelihood estimation (ALE)-based meta-analysis of the Stroop paradigm. Two versions of these data were evaluated, one using a more strict ALE threshold (P < 0.01) with a 13-node meta-analysis network, and the other a more lax threshold (P < 0.05) with a 22-node network. Java-based applications were developed for both RDNA and FSNA. The RDNA algorithm was modified to provide multiple subnets or maximal cliques for meta-analysis networks. Three different similarity measures were evaluated with FSNA to form subsets of nodes and experiments. RDNA provides a means to gauge importance of metanalysis subnets and complements FSNA, which provides a more comprehensive assessment of node similarity subsets, experiment similarity subsets, and overall node-to-factors similarity. The need to use both presence and absence of activations was an important finding in similarity analyses. FSNA revealed details from the pooled Stroop meta-analysis that would otherwise require separate highly filtered meta-analyses. These new analysis tools demonstrate how network analysis strategies can simplify greatly and enhance voxel-based meta-analyses.

Mesh:

Year:  2005        PMID: 15846809      PMCID: PMC6871705          DOI: 10.1002/hbm.20135

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  14 in total

1.  Automated Talairach atlas labels for functional brain mapping.

Authors:  J L Lancaster; M G Woldorff; L M Parsons; M Liotti; C S Freitas; L Rainey; P V Kochunov; D Nickerson; S A Mikiten; P T Fox
Journal:  Hum Brain Mapp       Date:  2000-07       Impact factor: 5.038

2.  Opinion: Mapping context and content: the BrainMap model.

Authors:  Peter T Fox; Jack L Lancaster
Journal:  Nat Rev Neurosci       Date:  2002-04       Impact factor: 34.870

3.  Neural modeling, functional brain imaging, and cognition.

Authors: 
Journal:  Trends Cogn Sci       Date:  1999-03       Impact factor: 20.229

4.  Meta-analysis of the functional neuroanatomy of single-word reading: method and validation.

Authors:  Peter E Turkeltaub; Guinevere F Eden; Karen M Jones; Thomas A Zeffiro
Journal:  Neuroimage       Date:  2002-07       Impact factor: 6.556

5.  Using replicator dynamics for analyzing fMRI data of the human brain.

Authors:  Gabriele Lohmann; Stefan Bohn
Journal:  IEEE Trans Med Imaging       Date:  2002-05       Impact factor: 10.048

6.  A comparison of label-based review and ALE meta-analysis in the Stroop task.

Authors:  Angela R Laird; Kathryn M McMillan; Jack L Lancaster; Peter Kochunov; Peter E Turkeltaub; Jose V Pardo; Peter T Fox
Journal:  Hum Brain Mapp       Date:  2005-05       Impact factor: 5.038

7.  Meta-analysis of functional imaging data using replicator dynamics.

Authors:  Jane Neumann; Gabriele Lohmann; Jan Derrfuss; D Yves von Cramon
Journal:  Hum Brain Mapp       Date:  2005-05       Impact factor: 5.038

8.  Dynamic causal modelling.

Authors:  K J Friston; L Harrison; W Penny
Journal:  Neuroimage       Date:  2003-08       Impact factor: 6.556

9.  Network analysis of cortical visual pathways mapped with PET.

Authors:  A R McIntosh; C L Grady; L G Ungerleider; J V Haxby; S I Rapoport; B Horwitz
Journal:  J Neurosci       Date:  1994-02       Impact factor: 6.167

10.  Attentional control in the aging brain: insights from an fMRI study of the stroop task.

Authors:  Michael P Milham; Kirk I Erickson; Marie T Banich; Arthur F Kramer; Andrew Webb; Tracey Wszalek; Neal J Cohen
Journal:  Brain Cogn       Date:  2002-08       Impact factor: 2.310

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  24 in total

1.  Amygdala recruitment in schizophrenia in response to aversive emotional material: a meta-analysis of neuroimaging studies.

Authors:  Alan Anticevic; Jared X Van Snellenberg; Rachel E Cohen; Grega Repovs; Erin C Dowd; Deanna M Barch
Journal:  Schizophr Bull       Date:  2010-12-01       Impact factor: 9.306

2.  Stuttered and fluent speech production: an ALE meta-analysis of functional neuroimaging studies.

Authors:  Steven Brown; Roger J Ingham; Janis C Ingham; Angela R Laird; Peter T Fox
Journal:  Hum Brain Mapp       Date:  2005-05       Impact factor: 5.038

Review 3.  Coordinate-based voxel-wise meta-analysis: dividends of spatial normalization. Report of a virtual workshop.

Authors:  Peter T Fox; Angela R Laird; Jack L Lancaster
Journal:  Hum Brain Mapp       Date:  2005-05       Impact factor: 5.038

4.  BrainMap taxonomy of experimental design: description and evaluation.

Authors:  Peter T Fox; Angela R Laird; Sarabeth P Fox; P Mickle Fox; Angela M Uecker; Michelle Crank; Sandra F Koenig; Jack L Lancaster
Journal:  Hum Brain Mapp       Date:  2005-05       Impact factor: 5.038

5.  The extended language network: a meta-analysis of neuroimaging studies on text comprehension.

Authors:  Evelyn C Ferstl; Jane Neumann; Carsten Bogler; D Yves von Cramon
Journal:  Hum Brain Mapp       Date:  2008-05       Impact factor: 5.038

6.  Functional coactivation map of the human brain.

Authors:  Roberto Toro; Peter T Fox; Tomás Paus
Journal:  Cereb Cortex       Date:  2008-02-21       Impact factor: 5.357

7.  Model-based clustering of meta-analytic functional imaging data.

Authors:  Jane Neumann; D Yves von Cramon; Gabriele Lohmann
Journal:  Hum Brain Mapp       Date:  2008-02       Impact factor: 5.038

8.  Functional brain correlates of social and nonsocial processes in autism spectrum disorders: an activation likelihood estimation meta-analysis.

Authors:  Adriana Di Martino; Kathryn Ross; Lucina Q Uddin; Andrew B Sklar; F Xavier Castellanos; Michael P Milham
Journal:  Biol Psychiatry       Date:  2008-11-08       Impact factor: 13.382

Review 9.  The restless brain: attention-deficit hyperactivity disorder, resting-state functional connectivity, and intrasubject variability.

Authors:  F Xavier Castellanos; Clare Kelly; Michael P Milham
Journal:  Can J Psychiatry       Date:  2009-10       Impact factor: 4.356

10.  ALE Meta-Analysis Workflows Via the Brainmap Database: Progress Towards A Probabilistic Functional Brain Atlas.

Authors:  Angela R Laird; Simon B Eickhoff; Florian Kurth; Peter M Fox; Angela M Uecker; Jessica A Turner; Jennifer L Robinson; Jack L Lancaster; Peter T Fox
Journal:  Front Neuroinform       Date:  2009-07-09       Impact factor: 4.081

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