Literature DB >> 15834640

Occurrence and characterization of PEND proteins in angiosperms.

Kimihiro Terasawa1, Naoki Sato.   

Abstract

The PEND protein is a DNA-binding protein in the inner envelope membrane of the developing chloroplast. It consists of a short pre-sequence, an N-terminal DNA-binding domain (cbZIP), a central repeat domain, and a C-terminal transmembrane domain. PEND homologs have been detected in various angiosperms, including Arabidopsis thaliana, Brassica napus, Medicago truncatula, cucumber and cherry. Monocot homologs have also been detected in barley and rice, but sequence conservation was low in monocots. PEND-related sequences have not been detected in non-flowering plants and algae. Green fluorescent protein fusions consisting of the N-terminal as well as full-length PEND homologs in A. thaliana and B. napus were targeted to chloroplasts, and localized to nucleoids and chloroplast periphery, respectively. Immunoblot analysis suggested that crucifer homologs were present in chloroplasts probably as a dimer, as in the case of pea. These results suggest that PEND protein is present in angiosperms, and the homologs in crucifers are functionally analogous to the PEND protein in pea.

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Year:  2005        PMID: 15834640     DOI: 10.1007/s10265-005-0200-z

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  18 in total

Review 1.  Do plastid envelope membranes play a role in the expression of the plastid genome?

Authors:  N Sato; N Rolland; M A Block; J Joyard
Journal:  Biochimie       Date:  1999-06       Impact factor: 4.079

2.  SISEQ: manipulation of multiple sequence and large database files for common platforms.

Authors:  N Sato
Journal:  Bioinformatics       Date:  2000-02       Impact factor: 6.937

Review 3.  Organization, developmental dynamics, and evolution of plastid nucleoids.

Authors:  Naoki Sato; Kimihiro Terasawa; Kazunori Miyajima; Yukihiro Kabeya
Journal:  Int Rev Cytol       Date:  2003

4.  Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D.

Authors:  Motomichi Matsuzaki; Osami Misumi; Tadasu Shin-I; Shinichiro Maruyama; Manabu Takahara; Shin-Ya Miyagishima; Toshiyuki Mori; Keiji Nishida; Fumi Yagisawa; Keishin Nishida; Yamato Yoshida; Yoshiki Nishimura; Shunsuke Nakao; Tamaki Kobayashi; Yu Momoyama; Tetsuya Higashiyama; Ayumi Minoda; Masako Sano; Hisayo Nomoto; Kazuko Oishi; Hiroko Hayashi; Fumiko Ohta; Satoko Nishizaka; Shinobu Haga; Sachiko Miura; Tomomi Morishita; Yukihiro Kabeya; Kimihiro Terasawa; Yutaka Suzuki; Yasuyuki Ishii; Shuichi Asakawa; Hiroyoshi Takano; Niji Ohta; Haruko Kuroiwa; Kan Tanaka; Nobuyoshi Shimizu; Sumio Sugano; Naoki Sato; Hisayoshi Nozaki; Naotake Ogasawara; Yuji Kohara; Tsuneyoshi Kuroiwa
Journal:  Nature       Date:  2004-04-08       Impact factor: 49.962

5.  Molecular characterization of the PEND protein, a novel bZIP protein present in the envelope membrane that is the site of nucleoid replication in developing plastids.

Authors:  N Sato; K Ohshima; A Watanabe; N Ohta; Y Nishiyama; J Joyard; R Douce
Journal:  Plant Cell       Date:  1998-05       Impact factor: 11.277

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.

Authors:  O Emanuelsson; H Nielsen; S Brunak; G von Heijne
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

8.  Engineered GFP as a vital reporter in plants.

Authors:  W Chiu; Y Niwa; W Zeng; T Hirano; H Kobayashi; J Sheen
Journal:  Curr Biol       Date:  1996-03-01       Impact factor: 10.834

9.  Comparison of a Brassica oleracea genetic map with the genome of Arabidopsis thaliana.

Authors:  Lewis Lukens; Fei Zou; Derek Lydiate; Isobel Parkin; Tom Osborn
Journal:  Genetics       Date:  2003-05       Impact factor: 4.562

10.  PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids.

Authors:  Eric Jenczewski; Frédérique Eber; Agnès Grimaud; Sylvie Huet; Marie Odile Lucas; Hervé Monod; Anne Marie Chèvre
Journal:  Genetics       Date:  2003-06       Impact factor: 4.562

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  4 in total

1.  Nucleoid-enriched proteomes in developing plastids and chloroplasts from maize leaves: a new conceptual framework for nucleoid functions.

Authors:  Wojciech Majeran; Giulia Friso; Yukari Asakura; Xian Qu; Mingshu Huang; Lalit Ponnala; Kenneth P Watkins; Alice Barkan; Klaas J van Wijk
Journal:  Plant Physiol       Date:  2011-11-07       Impact factor: 8.340

Review 2.  New insights into plastid nucleoid structure and functionality.

Authors:  Karin Krupinska; Joanna Melonek; Kirsten Krause
Journal:  Planta       Date:  2012-12-05       Impact factor: 4.116

Review 3.  Dynamic composition, shaping and organization of plastid nucleoids.

Authors:  Marta Powikrowska; Svenja Oetke; Poul E Jensen; Karin Krupinska
Journal:  Front Plant Sci       Date:  2014-09-04       Impact factor: 5.753

Review 4.  Genome communication in plants mediated by organelle-n-ucleus-located proteins.

Authors:  Karin Krupinska; Nicolás E Blanco; Svenja Oetke; Michela Zottini
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-05-04       Impact factor: 6.237

  4 in total

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