Literature DB >> 15832316

Source density-driven independent component analysis approach for fMRI data.

Baoming Hong1, Godfrey D Pearlson, Vince D Calhoun.   

Abstract

Independent component analysis (ICA) has become a popular tool for functional magnetic resonance imaging (fMRI) data analysis. Conventional ICA algorithms including Infomax and FAST-ICA algorithms employ the underlying assumption that data can be decomposed into statistically independent sources and implicitly model the probability density functions of the underlying sources as highly kurtotic or symmetric. When source data violate these assumptions (e.g., are asymmetric), however, conventional ICA methods might not work well. As a result, modeling of the underlying sources becomes an important issue for ICA applications. We propose a source density-driven ICA (SD-ICA) method. The SD-ICA algorithm involves a two-step procedure. It uses a conventional ICA algorithm to obtain initial independent source estimates for the first-step and then, using a kernel estimator technique, the source density is calculated. A refitted nonlinear function is used for each source at the second step. We show that the proposed SD-ICA algorithm provides flexible source adaptivity and improves ICA performance. On SD-ICA application to fMRI signals, the physiologic meaningful components (e.g., activated regions) of fMRI signals are governed typically by a small percentage of the whole-brain map on a task-related activation. Extra prior information (using a skewed-weighted distribution transformation) is thus additionally applied to the algorithm for the regions of interest of data (e.g., visual activated regions) to emphasize the importance of the tail part of the distribution. Our experimental results show that the source density-driven ICA method can improve performance further by incorporating some a priori information into ICA analysis of fMRI signals.

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Year:  2005        PMID: 15832316      PMCID: PMC6871729          DOI: 10.1002/hbm.20100

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  18 in total

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5.  Different activation dynamics in multiple neural systems during simulated driving.

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Journal:  Hum Brain Mapp       Date:  2002-07       Impact factor: 5.038

6.  Efficient source adaptivity in independent component analysis.

Authors:  N Vlassis; Y Motomura
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7.  Independent component analysis of fMRI data: examining the assumptions.

Authors:  M J McKeown; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

8.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

9.  Latencies in fMRI time-series: effect of slice acquisition order and perception.

Authors:  P F Van de Moortele; B Cerf; E Lobel; A L Paradis; A Faurion; D Le Bihan
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  6 in total

1.  Higher-order contrast functions improve performance of independent component analysis of fMRI data.

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2.  A unified framework for group independent component analysis for multi-subject fMRI data.

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Review 3.  A review of independent component analysis application to microarray gene expression data.

Authors:  Wei Kong; Charles R Vanderburg; Hiromi Gunshin; Jack T Rogers; Xudong Huang
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Review 4.  A review of group ICA for fMRI data and ICA for joint inference of imaging, genetic, and ERP data.

Authors:  Vince D Calhoun; Jingyu Liu; Tülay Adali
Journal:  Neuroimage       Date:  2008-11-13       Impact factor: 6.556

5.  Independent component analysis for brain FMRI does indeed select for maximal independence.

Authors:  Vince D Calhoun; Vamsi K Potluru; Ronald Phlypo; Rogers F Silva; Barak A Pearlmutter; Arvind Caprihan; Sergey M Plis; Tülay Adalı
Journal:  PLoS One       Date:  2013-08-29       Impact factor: 3.240

Review 6.  A review of multivariate analyses in imaging genetics.

Authors:  Jingyu Liu; Vince D Calhoun
Journal:  Front Neuroinform       Date:  2014-03-26       Impact factor: 4.081

  6 in total

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