Literature DB >> 15831473

The Mcp element from the bithorax complex contains an insulator that is capable of pairwise interactions and can facilitate enhancer-promoter communication.

Natalia Gruzdeva1, Olga Kyrchanova, Alexander Parshikov, Andrey Kullyev, Pavel Georgiev.   

Abstract

Chromatin insulators, or boundary elements, appear to control eukaryotic gene expression by regulating interactions between enhancers and promoters. Boundaries have been identified in the 3' cis-regulatory region of Abd-B, which is subdivided into a series of separate iab domains. Boundary elements such as Mcp, Fab-7, and Fab-8 and adjacent silencers flank the iab domains and restrict the activity of the iab enhancers. We have identified an insulator in the 755-bp Mcp fragment that is linked to the previously characterized Polycomb response element (PRE) and silences the adjacent genes. This insulator blocks the enhancers of the yellow and white genes and protects them from PRE-mediated repression. The interaction between the Mcp elements, each containing the insulator and PRE, allows the eye enhancer to activate the white promoter over the repressed yellow domain. The same level of white activation was observed when the Mcp element combined with the insulator alone was interposed between the eye enhancer and the promoter, suggesting that the insulator is responsible for the interaction between the Mcp elements.

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Year:  2005        PMID: 15831473      PMCID: PMC1084309          DOI: 10.1128/MCB.25.9.3682-3689.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  45 in total

Review 1.  Chromatin insulators and boundaries: effects on transcription and nuclear organization.

Authors:  T I Gerasimova; V G Corces
Journal:  Annu Rev Genet       Date:  2001       Impact factor: 16.830

Review 2.  Insulators: many functions, many mechanisms.

Authors:  Adam G West; Miklos Gaszner; Gary Felsenfeld
Journal:  Genes Dev       Date:  2002-02-01       Impact factor: 11.361

3.  Effects of cis arrangement of chromatin insulators on enhancer-blocking activity.

Authors:  H N Cai; P Shen
Journal:  Science       Date:  2001-01-19       Impact factor: 47.728

Review 4.  Setting the boundaries of chromatin domains and nuclear organization.

Authors:  Mariano Labrador; Victor G Corces
Journal:  Cell       Date:  2002-10-18       Impact factor: 41.582

Review 5.  Blockers and barriers to transcription: competing activities?

Authors:  Masaya Oki; Rohinton T Kamakaka
Journal:  Curr Opin Cell Biol       Date:  2002-06       Impact factor: 8.382

6.  The promoter targeting sequence facilitates and restricts a distant enhancer to a single promoter in the Drosophila embryo.

Authors:  Qing Lin; Di Wu; Jumin Zhou
Journal:  Development       Date:  2003-02       Impact factor: 6.868

7.  The Promoter Targeting Sequence mediates epigenetically heritable transcription memory.

Authors:  Qing Lin; Qi Chen; Lan Lin; Jumin Zhou
Journal:  Genes Dev       Date:  2004-11-01       Impact factor: 11.361

8.  The mcp element from the Drosophila melanogaster bithorax complex mediates long-distance regulatory interactions.

Authors:  M Muller; K Hagstrom; H Gyurkovics; V Pirrotta; P Schedl
Journal:  Genetics       Date:  1999-11       Impact factor: 4.562

9.  Loss of insulator activity by paired Su(Hw) chromatin insulators.

Authors:  E Muravyova; A Golovnin; E Gracheva; A Parshikov; T Belenkaya; V Pirrotta; P Georgiev
Journal:  Science       Date:  2001-01-19       Impact factor: 47.728

10.  The MCP silencer of the Drosophila Abd-B gene requires both Pleiohomeotic and GAGA factor for the maintenance of repression.

Authors:  A Busturia; A Lloyd; F Bejarano; M Zavortink; H Xin; S Sakonju
Journal:  Development       Date:  2001-06       Impact factor: 6.868

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  49 in total

1.  Mechanism of chromosomal boundary action: roadblock, sink, or loop?

Authors:  Daryl Gohl; Tsutomu Aoki; Jason Blanton; Greg Shanower; Gretchen Kappes; Paul Schedl
Journal:  Genetics       Date:  2010-12-31       Impact factor: 4.562

2.  Study of the functional interaction between Mcp insulators from the Drosophila bithorax complex: effects of insulator pairing on enhancer-promoter communication.

Authors:  Olga Kyrchanova; Stepan Toshchakov; Alexander Parshikov; Pavel Georgiev
Journal:  Mol Cell Biol       Date:  2007-02-05       Impact factor: 4.272

3.  Enhancer blocking and transvection at the Drosophila apterous locus.

Authors:  Daryl Gohl; Martin Müller; Vincenzo Pirrotta; Markus Affolter; Paul Schedl
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

4.  Investigation of the properties of non-gypsy suppressor of hairy-wing-binding sites.

Authors:  Emily J Kuhn-Parnell; Cecilia Helou; David J Marion; Brian L Gilmore; Timothy J Parnell; Marc S Wold; Pamela K Geyer
Journal:  Genetics       Date:  2008-06-18       Impact factor: 4.562

5.  Enhancer-promoter communication is regulated by insulator pairing in a Drosophila model bigenic locus.

Authors:  Oksana Maksimenko; Anton Golovnin; Pavel Georgiev
Journal:  Mol Cell Biol       Date:  2008-06-23       Impact factor: 4.272

Review 6.  Chromatin insulators: regulatory mechanisms and epigenetic inheritance.

Authors:  Ashley M Bushey; Elizabeth R Dorman; Victor G Corces
Journal:  Mol Cell       Date:  2008-10-10       Impact factor: 17.970

7.  Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions.

Authors:  Ashley M Bushey; Edward Ramos; Victor G Corces
Journal:  Genes Dev       Date:  2009-05-14       Impact factor: 11.361

Review 8.  Nuclear organization and genome function.

Authors:  Kevin Van Bortle; Victor G Corces
Journal:  Annu Rev Cell Dev Biol       Date:  2012-08-17       Impact factor: 13.827

9.  Vertebrate Protein CTCF and its Multiple Roles in a Large-Scale Regulation of Genome Activity.

Authors:  L G Nikolaev; S B Akopov; D A Didych; E D Sverdlov
Journal:  Curr Genomics       Date:  2009-08       Impact factor: 2.236

10.  Orientation-dependent interaction between Drosophila insulators is a property of this class of regulatory elements.

Authors:  Olga Kyrchanova; Darya Chetverina; Oksana Maksimenko; Andrey Kullyev; Pavel Georgiev
Journal:  Nucleic Acids Res       Date:  2008-11-05       Impact factor: 16.971

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