Literature DB >> 15817685

Reverse recruitment: the Nup84 nuclear pore subcomplex mediates Rap1/Gcr1/Gcr2 transcriptional activation.

Balaraj B Menon1, Nayan J Sarma, Satish Pasula, Stephen J Deminoff, Kristine A Willis, Kellie E Barbara, Brenda Andrews, George M Santangelo.   

Abstract

The recruitment model for gene activation presumes that DNA is a platform on which the requisite components of the transcriptional machinery are assembled. In contrast to this idea, we show here that Rap1/Gcr1/Gcr2 transcriptional activation in yeast cells occurs through a large anchored protein platform, the Nup84 nuclear pore subcomplex. Surprisingly, Nup84 and associated subcomplex components activate transcription themselves in vivo when fused to a heterologous DNA-binding domain. The Rap1 coactivators Gcr1 and Gcr2 form an important bridge between the yeast nuclear pore complex and the transcriptional machinery. Nucleoporin activation may be a widespread eukaryotic phenomenon, because it was first detected as a consequence of oncogenic rearrangements in acute myeloid leukemia and related syndromes in humans. These chromosomal translocations fuse a homeobox DNA-binding domain to the human homolog (hNup98) of a transcriptionally active component of the yeast Nup84 subcomplex. We conclude that Rap1 target genes are activated by moving to contact compartmentalized nuclear assemblages, rather than through recruitment of the requisite factors to chromatin by means of diffusion. We term this previously undescribed mechanism "reverse recruitment" and discuss the possibility that it is a central feature of eukaryotic gene regulation. Reverse recruitment stipulates that activators work by bringing the DNA to an nuclear pore complex-tethered platform of assembled transcriptional machine components.

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Year:  2005        PMID: 15817685      PMCID: PMC556015          DOI: 10.1073/pnas.0501768102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

Review 1.  An extensive network of coupling among gene expression machines.

Authors:  Tom Maniatis; Robin Reed
Journal:  Nature       Date:  2002-04-04       Impact factor: 49.962

2.  Rap1p requires Gcr1p and Gcr2p homodimers to activate ribosomal protein and glycolytic genes, respectively.

Authors:  S J Deminoff; G M Santangelo
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

3.  Nuclear pore complexes in the organization of silent telomeric chromatin.

Authors:  V Galy; J C Olivo-Marin; H Scherthan; V Doye; N Rascalou; U Nehrbass
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

4.  Systematic genetic analysis with ordered arrays of yeast deletion mutants.

Authors:  A H Tong; M Evangelista; A B Parsons; H Xu; G D Bader; N Pagé; M Robinson; S Raghibizadeh; C W Hogue; H Bussey; B Andrews; M Tyers; C Boone
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

5.  Localization of yeast telomeres to the nuclear periphery is separable from transcriptional repression and telomere stability functions.

Authors:  W H Tham; J S Wyithe; P Ko Ferrigno; P A Silver; V A Zakian
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

6.  Nuclear architecture and spatial positioning help establish transcriptional states of telomeres in yeast.

Authors:  Frank Feuerbach; Vincent Galy; Edgar Trelles-Sticken; Micheline Fromont-Racine; Alain Jacquier; Eric Gilson; Jean-Christophe Olivo-Marin; Harry Scherthan; Ulf Nehrbass
Journal:  Nat Cell Biol       Date:  2002-03       Impact factor: 28.824

Review 7.  Mediator of transcriptional regulation.

Authors:  L C Myers; R D Kornberg
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

8.  Chromatin boundaries in budding yeast: the nuclear pore connection.

Authors:  Kojiro Ishii; Ghislaine Arib; Clayton Lin; Griet Van Houwe; Ulrich K Laemmli
Journal:  Cell       Date:  2002-05-31       Impact factor: 41.582

9.  Structure and assembly of the Nup84p complex.

Authors:  S Siniossoglou; M Lutzmann; H Santos-Rosa; K Leonard; S Mueller; U Aebi; E Hurt
Journal:  J Cell Biol       Date:  2000-04-03       Impact factor: 10.539

10.  The yeast nuclear pore complex: composition, architecture, and transport mechanism.

Authors:  M P Rout; J D Aitchison; A Suprapto; K Hjertaas; Y Zhao; B T Chait
Journal:  J Cell Biol       Date:  2000-02-21       Impact factor: 10.539

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  76 in total

Review 1.  The budding yeast nucleus.

Authors:  Angela Taddei; Heiko Schober; Susan M Gasser
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-16       Impact factor: 10.005

2.  Intron or no intron: a matter for nuclear pore complexes.

Authors:  Amandine Bonnet; Benoit Palancade
Journal:  Nucleus       Date:  2015-12-28       Impact factor: 4.197

Review 3.  Nuclear pore complexes and regulation of gene expression.

Authors:  Marcela Raices; Maximiliano A D'Angelo
Journal:  Curr Opin Cell Biol       Date:  2017-01-11       Impact factor: 8.382

4.  TFIID and Spt-Ada-Gcn5-acetyltransferase functions probed by genome-wide synthetic genetic array analysis using a Saccharomyces cerevisiae taf9-ts allele.

Authors:  Elena Milgrom; Robert W West; Chen Gao; W-C Winston Shen
Journal:  Genetics       Date:  2005-08-22       Impact factor: 4.562

5.  3'-end formation signals modulate the association of genes with the nuclear periphery as well as mRNP dot formation.

Authors:  Katharine C Abruzzi; Dmitry A Belostotsky; Julia A Chekanova; Ken Dower; Michael Rosbash
Journal:  EMBO J       Date:  2006-08-31       Impact factor: 11.598

6.  A versatile interaction platform on the Mex67-Mtr2 receptor creates an overlap between mRNA and ribosome export.

Authors:  Wei Yao; Malik Lutzmann; Ed Hurt
Journal:  EMBO J       Date:  2007-11-29       Impact factor: 11.598

7.  Nucleoporins prevent DNA damage accumulation by modulating Ulp1-dependent sumoylation processes.

Authors:  Benoit Palancade; Xianpeng Liu; Maria Garcia-Rubio; Andrès Aguilera; Xiaolan Zhao; Valérie Doye
Journal:  Mol Biol Cell       Date:  2007-05-30       Impact factor: 4.138

8.  Sus1, Sac3, and Thp1 mediate post-transcriptional tethering of active genes to the nuclear rim as well as to non-nascent mRNP.

Authors:  Julia A Chekanova; Katharine C Abruzzi; Michael Rosbash; Dmitry A Belostotsky
Journal:  RNA       Date:  2007-11-14       Impact factor: 4.942

9.  Genomic analysis of the Opi- phenotype.

Authors:  Leandria C Hancock; Ryan P Behta; John M Lopes
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

10.  Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interaction.

Authors:  Krassimira A Garbett; Manish K Tripathi; Belgin Cencki; Justin H Layer; P Anthony Weil
Journal:  Mol Cell Biol       Date:  2006-10-30       Impact factor: 4.272

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