Literature DB >> 15814431

DNA polymerases that propagate the eukaryotic DNA replication fork.

Parie Garg1, Peter M J Burgers.   

Abstract

Three DNA polymerases are thought to function at the eukaryotic DNA replication fork. Currently, a coherent model has been derived for the composition and activities of the lagging strand machinery. RNA-DNA primers are initiated by DNA polymerase ot-primase. Loading of the proliferating cell nuclear antigen, PCNA, dissociates DNA polymerase ca and recruits DNA polymerase S and the flap endonuclease FEN1 for elongation and in preparation for its requirement during maturation, respectively. Nick translation by the strand displacement action of DNA polymerase 8, coupled with the nuclease action of FEN1, results in processive RNA degradation until a proper DNA nick is reached for closure by DNA ligase I. In the event of excessive strand displacement synthesis, other factors, such as the Dna2 nuclease/helicase, are required to trim excess flaps. Paradoxically, the composition and activity of the much simpler leading strand machinery has not been clearly established. The burden of evidence suggests that DNA polymerase E normally replicates this strand,but under conditions of dysfunction, DNA polymerase 8 may substitute.

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Year:  2005        PMID: 15814431     DOI: 10.1080/10409230590935433

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  138 in total

1.  Modulation of the Pyrococcus abyssi NucS endonuclease activity by replication clamp at functional and structural levels.

Authors:  Christophe Creze; Alessio Ligabue; Sébastien Laurent; Roxane Lestini; Sergey P Laptenok; Joelle Khun; Marten H Vos; Mirjam Czjzek; Hannu Myllykallio; Didier Flament
Journal:  J Biol Chem       Date:  2012-03-19       Impact factor: 5.157

2.  DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.

Authors:  Andrey G Baranovskiy; Artem G Lada; Hollie M Siebler; Yinbo Zhang; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

3.  Insights into eukaryotic DNA priming from the structure and functional interactions of the 4Fe-4S cluster domain of human DNA primase.

Authors:  Sivaraja Vaithiyalingam; Eric M Warren; Brandt F Eichman; Walter J Chazin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

4.  DNA polymerases δ and λ cooperate in repairing double-strand breaks by microhomology-mediated end-joining in Saccharomyces cerevisiae.

Authors:  Damon Meyer; Becky Xu Hua Fu; Wolf-Dietrich Heyer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-25       Impact factor: 11.205

5.  Insight into the Human DNA Primase Interaction with Template-Primer.

Authors:  Andrey G Baranovskiy; Yinbo Zhang; Yoshiaki Suwa; Jianyou Gu; Nigar D Babayeva; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2015-12-28       Impact factor: 5.157

6.  The p12 subunit of human polymerase delta modulates the rate and fidelity of DNA synthesis.

Authors:  Xiao Meng; Yajing Zhou; Ernest Y C Lee; Marietta Y W T Lee; David N Frick
Journal:  Biochemistry       Date:  2010-05-04       Impact factor: 3.162

7.  Evidence for extrinsic exonucleolytic proofreading.

Authors:  Stephanie A Nick McElhinny; Youri I Pavlov; Thomas A Kunkel
Journal:  Cell Cycle       Date:  2006-05-01       Impact factor: 4.534

8.  Redox Chemistry in the Genome: Emergence of the [4Fe4S] Cofactor in Repair and Replication.

Authors:  Jacqueline K Barton; Rebekah M B Silva; Elizabeth O'Brien
Journal:  Annu Rev Biochem       Date:  2019-06-20       Impact factor: 23.643

9.  Expression of the p12 subunit of human DNA polymerase δ (Pol δ), CDK inhibitor p21(WAF1), Cdt1, cyclin A, PCNA and Ki-67 in relation to DNA replication in individual cells.

Authors:  Hong Zhao; Sufang Zhang; Dazhong Xu; Marietta Ywt Lee; Zhongtao Zhang; Ernest Yc Lee; Zbigniew Darzynkiewicz
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

10.  X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.

Authors:  Andrey G Baranovskiy; Nigar D Babayeva; Victoria G Liston; Igor B Rogozin; Eugene V Koonin; Youri I Pavlov; Dmitry G Vassylyev; Tahir H Tahirov
Journal:  Cell Cycle       Date:  2008-10-04       Impact factor: 4.534

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