Literature DB >> 15796704

Ultrafast chemistry: using time-resolved vibrational spectroscopy for interrogation of structural dynamics.

Erik T J Nibbering1, Henk Fidder, Ehud Pines.   

Abstract

Time-resolved infrared (IR) and Raman spectroscopy elucidates molecular structure evolution during ultrafast chemical reactions. Following vibrational marker modes in real time provides direct insight into the structural dynamics, as is evidenced in studies on intramolecular hydrogen transfer, bimolecular proton transfer, electron transfer, hydrogen bonding during solvation dynamics, bond fission in organometallic compounds and heme proteins, cis-trans isomerization in retinal proteins, and transformations in photochromic switch pairs. Femtosecond IR spectroscopy monitors the site-specific interactions in hydrogen bonds. Conversion between excited electronic states can be followed for intramolecular electron transfer by inspection of the fingerprint IR- or Raman-active vibrations in conjunction with quantum chemical calculations. Excess internal vibrational energy, generated either by optical excitation or by internal conversion from the electronic excited state to the ground state, is observable through transient frequency shifts of IR-active vibrations and through nonequilibrium populations as deduced by Raman resonances.

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Year:  2005        PMID: 15796704     DOI: 10.1146/annurev.physchem.56.092503.141314

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  28 in total

1.  Influence of the crystalline state on photoinduced dynamics of photoactive yellow protein studied by ultraviolet-visible transient absorption spectroscopy.

Authors:  Sergey Yeremenko; Ivo H M van Stokkum; Keith Moffat; Klaas J Hellingwerf
Journal:  Biophys J       Date:  2006-03-02       Impact factor: 4.033

2.  Characterization of the primary photochemistry of proteorhodopsin with femtosecond spectroscopy.

Authors:  Alisa Rupenyan; Ivo H M van Stokkum; Jos C Arents; Rienk van Grondelle; Klaas Hellingwerf; Marie Louise Groot
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

Review 3.  Hydrogenase Enzymes and Their Synthetic Models: The Role of Metal Hydrides.

Authors:  David Schilter; James M Camara; Mioy T Huynh; Sharon Hammes-Schiffer; Thomas B Rauchfuss
Journal:  Chem Rev       Date:  2016-06-29       Impact factor: 60.622

4.  Structural evolution of the chromophore in the primary stages of trans/cis isomerization in photoactive yellow protein.

Authors:  Karsten Heyne; Omar F Mohammed; Anwar Usman; Jens Dreyer; Erik T J Nibbering; Michael A Cusanovich
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

5.  Orbital-specific mapping of the ligand exchange dynamics of Fe(CO)5 in solution.

Authors:  Ph Wernet; K Kunnus; I Josefsson; I Rajkovic; W Quevedo; M Beye; S Schreck; S Grübel; M Scholz; D Nordlund; W Zhang; R W Hartsock; W F Schlotter; J J Turner; B Kennedy; F Hennies; F M F de Groot; K J Gaffney; S Techert; M Odelius; A Föhlisch
Journal:  Nature       Date:  2015-04-02       Impact factor: 49.962

6.  Photoinduced electron transfer in folic acid investigated by ultrafast infrared spectroscopy.

Authors:  Guifeng Li; Donny Magana; R Brian Dyer
Journal:  J Phys Chem B       Date:  2012-03-06       Impact factor: 2.991

7.  Site-specific measurement of water dynamics in the substrate pocket of ketosteroid isomerase using time-resolved vibrational spectroscopy.

Authors:  Santosh Kumar Jha; Minbiao Ji; Kelly J Gaffney; Steven G Boxer
Journal:  J Phys Chem B       Date:  2012-09-07       Impact factor: 2.991

8.  Kinetic Isotope Effect Provides Insight into the Vibrational Relaxation Mechanism of Aromatic Molecules: Application to Cyano-phenylalanine.

Authors:  Jeffrey M Rodgers; Wenkai Zhang; Christopher G Bazewicz; Jianxin Chen; Scott H Brewer; Feng Gai
Journal:  J Phys Chem Lett       Date:  2016-03-22       Impact factor: 6.475

9.  Broadband infrared and Raman probes of excited-state vibrational molecular dynamics: simulation protocols based on loop diagrams.

Authors:  Konstantin E Dorfman; Benjamin P Fingerhut; Shaul Mukamel
Journal:  Phys Chem Chem Phys       Date:  2013-06-19       Impact factor: 3.676

10.  Coherent control of a surface structural phase transition.

Authors:  Jan Gerrit Horstmann; Hannes Böckmann; Bareld Wit; Felix Kurtz; Gero Storeck; Claus Ropers
Journal:  Nature       Date:  2020-07-08       Impact factor: 49.962

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