Literature DB >> 15774868

Regulation of major cellulosomal endoglucanases of Clostridium thermocellum differs from that of a prominent cellulosomal xylanase.

Tali W Dror1, Adi Rolider, Edward A Bayer, Raphael Lamed, Yuval Shoham.   

Abstract

The expression of scaffoldin-anchoring genes and one of the major processive endoglucanases (CelS) from the cellulosome of Clostridium thermocellum has been shown to be dependent on the growth rate. For the present work, we studied the gene regulation of selected cellulosomal endoglucanases and a major xylanase in order to examine the previously observed substrate-linked alterations in cellulosome composition. For this purpose, the transcript levels of genes encoding endoglucanases CelB, CelG, and CelD and the family 10 xylanase XynC were determined in batch cultures, grown on either cellobiose or cellulose, and in carbon-limited continuous cultures at different dilution rates. Under all conditions tested, the transcript levels of celB and celG were at least 10-fold higher than that of celD. Like the major processive endoglucanase CelS, the transcript levels of these endoglucanase genes were also dependent on the growth rate. Thus, at a rate of 0.04 h(-1), the levels of celB, celG, and celD were threefold higher than those obtained in cultures grown at maximal rates (0.35 h(-1)) on cellobiose. In contrast, no clear correlation was observed between the transcript level of xynC and the growth rate-the levels remained relatively high, fluctuating between 30 and 50 transcripts per cell. The results suggest that the regulation of C. thermocellum endoglucanases is similar to that of the processive endoglucanase celS but differs from that of a major cellulosomal xylanase in that expression of the latter enzyme is independent of the growth rate.

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Year:  2005        PMID: 15774868      PMCID: PMC1065243          DOI: 10.1128/JB.187.7.2261-2266.2005

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  31 in total

Review 1.  The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides.

Authors:  Y Shoham; R Lamed; E A Bayer
Journal:  Trends Microbiol       Date:  1999-07       Impact factor: 17.079

Review 2.  The cellulosome and cellulose degradation by anaerobic bacteria.

Authors:  W H Schwarz
Journal:  Appl Microbiol Biotechnol       Date:  2001-09       Impact factor: 4.813

3.  Regulation of expression of cellulosomal cellulase and hemicellulase genes in Clostridium cellulovorans.

Authors:  Sung Ok Han; Hideaki Yukawa; Masayuki Inui; Roy H Doi
Journal:  J Bacteriol       Date:  2003-10       Impact factor: 3.490

Review 4.  Cellulosomes from mesophilic bacteria.

Authors:  Roy H Doi; Akihiko Kosugi; Koichiro Murashima; Yutaka Tamaru; Sung Ok Han
Journal:  J Bacteriol       Date:  2003-10       Impact factor: 3.490

5.  Synergistic interaction of the cellulosome integrating protein (CipA) from Clostridium thermocellum with a cellulosomal endoglucanase.

Authors:  A Ciruela; H J Gilbert; B R Ali; G P Hazlewood
Journal:  FEBS Lett       Date:  1998-01-30       Impact factor: 4.124

6.  Adherence of Clostridium thermocellum to cellulose.

Authors:  E A Bayer; R Kenig; R Lamed
Journal:  J Bacteriol       Date:  1983-11       Impact factor: 3.490

7.  Characterization of a cellulose-binding, cellulase-containing complex in Clostridium thermocellum.

Authors:  R Lamed; E Setter; E A Bayer
Journal:  J Bacteriol       Date:  1983-11       Impact factor: 3.490

Review 8.  The cellulosome: the exocellular organelle of Clostridium.

Authors:  C R Felix; L G Ljungdahl
Journal:  Annu Rev Microbiol       Date:  1993       Impact factor: 15.500

9.  Cloning and DNA sequence of the gene coding for Clostridium thermocellum cellulase Ss (CelS), a major cellulosome component.

Authors:  W K Wang; K Kruus; J H Wu
Journal:  J Bacteriol       Date:  1993-03       Impact factor: 3.490

10.  Identification of the cellulose-binding domain of the cellulosome subunit S1 from Clostridium thermocellum YS.

Authors:  D M Poole; E Morag; R Lamed; E A Bayer; G P Hazlewood; H J Gilbert
Journal:  FEMS Microbiol Lett       Date:  1992-12-01       Impact factor: 2.742

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  19 in total

1.  Draft genome sequences for Clostridium thermocellum wild-type strain YS and derived cellulose adhesion-defective mutant strain AD2.

Authors:  Steven D Brown; Raphael Lamed; Ely Morag; Ilya Borovok; Yuval Shoham; Dawn M Klingeman; Courtney M Johnson; Zamin Yang; Miriam L Land; Sagar M Utturkar; Martin Keller; Edward A Bayer
Journal:  J Bacteriol       Date:  2012-06       Impact factor: 3.490

2.  Demonstration of the importance for cellulose hydrolysis of CelS, the most abundant cellulosomal cellulase in Clostridium thermocellum [corrected].

Authors:  David B Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

3.  Global view of the Clostridium thermocellum cellulosome revealed by quantitative proteomic analysis.

Authors:  Nicholas D Gold; Vincent J J Martin
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

4.  Thermobifida fusca exoglucanase Cel6B is incompatible with the cellulosomal mode in contrast to endoglucanase Cel6A.

Authors:  Jonathan Caspi; Yoav Barak; Rachel Haimovitz; Hadar Gilary; Diana C Irwin; Raphael Lamed; David B Wilson; Edward A Bayer
Journal:  Syst Synth Biol       Date:  2010-04-30

5.  Global gene expression patterns in Clostridium thermocellum as determined by microarray analysis of chemostat cultures on cellulose or cellobiose.

Authors:  Allison Riederer; Taichi E Takasuka; Shin-ichi Makino; David M Stevenson; Yury V Bukhman; Nathaniel L Elsen; Brian G Fox
Journal:  Appl Environ Microbiol       Date:  2010-12-17       Impact factor: 4.792

6.  Clostridium thermocellum cellulosomal genes are regulated by extracytoplasmic polysaccharides via alternative sigma factors.

Authors:  Yakir Nataf; Liat Bahari; Hamutal Kahel-Raifer; Ilya Borovok; Raphael Lamed; Edward A Bayer; Abraham L Sonenshein; Yuval Shoham
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-11       Impact factor: 11.205

7.  Glycoside hydrolases as components of putative carbohydrate biosensor proteins in Clostridium thermocellum.

Authors:  Liat Bahari; Yuval Gilad; Ilya Borovok; Hamutal Kahel-Raifer; Bareket Dassa; Yakir Nataf; Yuval Shoham; Raphael Lamed; Edward A Bayer
Journal:  J Ind Microbiol Biotechnol       Date:  2010-09-06       Impact factor: 3.346

8.  Transcriptional regulation of the Clostridium cellulolyticum cip-cel operon: a complex mechanism involving a catabolite-responsive element.

Authors:  Laetitia Abdou; Céline Boileau; Pascale de Philip; Sandrine Pagès; Henri-Pierre Fiérobe; Chantal Tardif
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

9.  Induction of the celC operon of Clostridium thermocellum by laminaribiose.

Authors:  Michael Newcomb; Chun-Yu Chen; J H David Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-27       Impact factor: 11.205

10.  Proteomic analysis of Clostridium thermocellum core metabolism: relative protein expression profiles and growth phase-dependent changes in protein expression.

Authors:  Thomas Rydzak; Peter D McQueen; Oleg V Krokhin; Vic Spicer; Peyman Ezzati; Ravi C Dwivedi; Dmitry Shamshurin; David B Levin; John A Wilkins; Richard Sparling
Journal:  BMC Microbiol       Date:  2012-09-21       Impact factor: 3.605

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