Literature DB >> 21886683

Thermobifida fusca exoglucanase Cel6B is incompatible with the cellulosomal mode in contrast to endoglucanase Cel6A.

Jonathan Caspi, Yoav Barak, Rachel Haimovitz, Hadar Gilary, Diana C Irwin, Raphael Lamed, David B Wilson, Edward A Bayer.   

Abstract

Cellulosomes are efficient cellulose-degradation systems produced by selected anaerobic bacteria. This multi-enzyme complex is assembled from a group of cellulases attached to a protein scaffold termed scaffoldin, mediated by a high-affinity protein-protein interaction between the enzyme-borne dockerin module and the cohesin module of the scaffoldin. The enzymatic complex is attached as a whole to the cellulosic substrate via a cellulose-binding module (CBM) on the scaffoldin subunit. In previous works, we have employed a synthetic biology approach to convert several of the free cellulases of the aerobic bacterium, Thermobifida fusca, into the cellulosomal mode by replacing each of the enzymes' CBM with a dockerin. Here we show that although family six enzymes are not a part of any known cellulosomal system, the two family six enzymes of the T. fusca system (endoglucanase Cel6A and exoglucanase Cel6B) can be converted to work as cellulosomal enzymes. Indeed, the chimaeric dockerin-containing family six endoglucanase worked well as a cellulosomal enzyme, and proved to be more efficient than the parent enzyme when present in designer cellulosomes. In stark contrast, the chimaeric family six exoglucanase was markedly less efficient than the wild-type enzyme when mixed with other T. fusca cellulases, thus indicating its incompatibility with the cellulosomal mode of action.

Entities:  

Keywords:  Bioenergy; Cellulases; Degradation of crystalline cellulose; Designer cellulosome; Enzyme synergy; Substrate targeting and enzyme proximity

Year:  2010        PMID: 21886683      PMCID: PMC2955202          DOI: 10.1007/s11693-010-9056-1

Source DB:  PubMed          Journal:  Syst Synth Biol        ISSN: 1872-5325


  31 in total

1.  Interaction between a type-II dockerin domain and a type-II cohesin domain from Clostridium thermocellum cellulosome.

Authors:  Sadanari Jindou; Tsutomu Kajino; Minoru Inagaki; Shuichi Karita; Pierre Beguin; Tetsuya Kimura; Kazuo Sakka; Kunio Ohmiya
Journal:  Biosci Biotechnol Biochem       Date:  2004-04       Impact factor: 2.043

2.  Exploration of new geometries in cellulosome-like chimeras.

Authors:  Florence Mingardon; Angélique Chanal; Chantal Tardif; Edward A Bayer; Henri-Pierre Fierobe
Journal:  Appl Environ Microbiol       Date:  2007-09-28       Impact factor: 4.792

3.  Cohesin-dockerin microarray: Diverse specificities between two complementary families of interacting protein modules.

Authors:  Rachel Haimovitz; Yoav Barak; Ely Morag; Milana Voronov-Goldman; Yuval Shoham; Raphael Lamed; Edward A Bayer
Journal:  Proteomics       Date:  2008-03       Impact factor: 3.984

4.  Cloning of the Thermomonospora fusca Endoglucanase E2 Gene in Streptomyces lividans: Affinity Purification and Functional Domains of the Cloned Gene Product.

Authors:  G S Ghangas; D B Wilson
Journal:  Appl Environ Microbiol       Date:  1988-10       Impact factor: 4.792

5.  Cohesin-dockerin interaction in cellulosome assembly: a single hydroxyl group of a dockerin domain distinguishes between nonrecognition and high affinity recognition.

Authors:  A Mechaly; H P Fierobe; A Belaich; J P Belaich; R Lamed; Y Shoham; E A Bayer
Journal:  J Biol Chem       Date:  2001-01-08       Impact factor: 5.157

6.  Studies of Thermobifida fusca plant cell wall degrading enzymes.

Authors:  David B Wilson
Journal:  Chem Rec       Date:  2004       Impact factor: 6.771

7.  Conversion of Thermobifida fusca free exoglucanases into cellulosomal components: comparative impact on cellulose-degrading activity.

Authors:  Jonathan Caspi; Diana Irwin; Raphael Lamed; Yongchao Li; Henri-Pierre Fierobe; David B Wilson; Edward A Bayer
Journal:  J Biotechnol       Date:  2008-05-16       Impact factor: 3.307

8.  Effect of linker length and dockerin position on conversion of a Thermobifida fusca endoglucanase to the cellulosomal mode.

Authors:  Jonathan Caspi; Yoav Barak; Rachel Haimovitz; Diana Irwin; Raphael Lamed; David B Wilson; Edward A Bayer
Journal:  Appl Environ Microbiol       Date:  2009-10-09       Impact factor: 4.792

9.  Induction of the celC operon of Clostridium thermocellum by laminaribiose.

Authors:  Michael Newcomb; Chun-Yu Chen; J H David Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-27       Impact factor: 11.205

10.  Characterization of a Thermomonospora fusca exocellulase.

Authors:  S Zhang; G Lao; D B Wilson
Journal:  Biochemistry       Date:  1995-03-14       Impact factor: 3.162

View more
  12 in total

1.  Integration of bacterial lytic polysaccharide monooxygenases into designer cellulosomes promotes enhanced cellulose degradation.

Authors:  Yonathan Arfi; Melina Shamshoum; Ilana Rogachev; Yoav Peleg; Edward A Bayer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-09       Impact factor: 11.205

2.  Toward combined delignification and saccharification of wheat straw by a laccase-containing designer cellulosome.

Authors:  Lital Davidi; Sarah Moraïs; Lior Artzi; Doriv Knop; Yitzhak Hadar; Yonathan Arfi; Edward A Bayer
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-12       Impact factor: 11.205

3.  Cellulase-xylanase synergy in designer cellulosomes for enhanced degradation of a complex cellulosic substrate.

Authors:  Sarah Moraïs; Yoav Barak; Jonathan Caspi; Yitzhak Hadar; Raphael Lamed; Yuval Shoham; David B Wilson; Edward A Bayer
Journal:  mBio       Date:  2010-12-14       Impact factor: 7.867

4.  Deconstruction of lignocellulose into soluble sugars by native and designer cellulosomes.

Authors:  Sarah Moraïs; Ely Morag; Yoav Barak; Dan Goldman; Yitzhak Hadar; Raphael Lamed; Yuval Shoham; David B Wilson; Edward A Bayer
Journal:  mBio       Date:  2012-12-11       Impact factor: 7.867

5.  Assembly of xylanases into designer cellulosomes promotes efficient hydrolysis of the xylan component of a natural recalcitrant cellulosic substrate.

Authors:  Sarah Moraïs; Yoav Barak; Yitzhak Hadar; David B Wilson; Yuval Shoham; Raphael Lamed; Edward A Bayer
Journal:  MBio       Date:  2011-11-15       Impact factor: 7.867

6.  Significance of relative position of cellulases in designer cellulosomes for optimized cellulolysis.

Authors:  Johanna Stern; Amaranta Kahn; Yael Vazana; Melina Shamshoum; Sarah Moraïs; Raphael Lamed; Edward A Bayer
Journal:  PLoS One       Date:  2015-05-29       Impact factor: 3.240

7.  Challenges and advances in the heterologous expression of cellulolytic enzymes: a review.

Authors:  Camilla Lambertz; Megan Garvey; Johannes Klinger; Dirk Heesel; Holger Klose; Rainer Fischer; Ulrich Commandeur
Journal:  Biotechnol Biofuels       Date:  2014-10-18       Impact factor: 6.040

8.  Paradigmatic status of an endo- and exoglucanase and its effect on crystalline cellulose degradation.

Authors:  Sarah Moraïs; Yoav Barak; Raphael Lamed; David B Wilson; Qi Xu; Michael E Himmel; Edward A Bayer
Journal:  Biotechnol Biofuels       Date:  2012-10-24       Impact factor: 6.040

9.  Improving activity of minicellulosomes by integration of intra- and intermolecular synergies.

Authors:  Qi Xu; Shi-You Ding; Roman Brunecky; Yannick J Bomble; Michael E Himmel; John O Baker
Journal:  Biotechnol Biofuels       Date:  2013-08-30       Impact factor: 6.040

10.  A synthetic biology approach for evaluating the functional contribution of designer cellulosome components to deconstruction of cellulosic substrates.

Authors:  Yael Vazana; Yoav Barak; Tamar Unger; Yoav Peleg; Melina Shamshoum; Tuval Ben-Yehezkel; Yair Mazor; Ehud Shapiro; Raphael Lamed; Edward A Bayer
Journal:  Biotechnol Biofuels       Date:  2013-12-16       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.