Literature DB >> 15761028

Imaging molecular interactions in living cells.

Richard N Day1, Fred Schaufele.   

Abstract

Hormones integrate the activities of their target cells through receptor-modulated cascades of protein interactions that ultimately lead to changes in cellular function. Understanding how the cell assembles these signaling protein complexes is critically important to unraveling disease processes, and to the design of therapeutic strategies. Recent advances in live-cell imaging technologies, combined with the use of genetically encoded fluorescent proteins, now allow the assembly of these signaling protein complexes to be tracked within the organized microenvironment of the living cell. Here, we review some of the recent developments in the application of imaging techniques to measure the dynamic behavior, colocalization, and spatial relationships between proteins in living cells. Where possible, we discuss the application of these different approaches in the context of hormone regulation of nuclear receptor localization, mobility, and interactions in different subcellular compartments. We discuss measurements that define the spatial relationships and dynamics between proteins in living cells including fluorescence colocalization, fluorescence recovery after photobleaching, fluorescence correlation spectroscopy, fluorescence resonance energy transfer microscopy, and fluorescence lifetime imaging microscopy. These live-cell imaging tools provide an important complement to biochemical and structural biology studies, extending the analysis of protein-protein interactions, protein conformational changes, and the behavior of signaling molecules to their natural environment within the intact cell.

Mesh:

Substances:

Year:  2005        PMID: 15761028      PMCID: PMC2900770          DOI: 10.1210/me.2005-0028

Source DB:  PubMed          Journal:  Mol Endocrinol        ISSN: 0888-8809


  98 in total

1.  Triple-color coincidence analysis: one step further in following higher order molecular complex formation.

Authors:  Katrin G Heinze; Michael Jahnz; Petra Schwille
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

2.  Graphical representation and multicomponent analysis of single-frequency fluorescence lifetime imaging microscopy data.

Authors:  A H A Clayton; Q S Hanley; P J Verveer
Journal:  J Microsc       Date:  2004-01       Impact factor: 1.758

3.  Probing protein oligomerization in living cells with fluorescence fluctuation spectroscopy.

Authors:  Yan Chen; Li-Na Wei; Joachim D Müller
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-12       Impact factor: 11.205

Review 4.  Quantitative fluorescence microscopy and image deconvolution.

Authors:  Jason R Swedlow
Journal:  Methods Cell Biol       Date:  2003       Impact factor: 1.441

Review 5.  Fluorescence-lifetime imaging techniques for microscopy.

Authors:  Chen Y Dong; Todd French; Peter T So; C Buehler; Keith M Berland; Enrico Gratton
Journal:  Methods Cell Biol       Date:  2003       Impact factor: 1.441

6.  Picosecond time-resolved microspectrofluorometry in live cells exemplified by complex fluorescence dynamics of popular probes ethidium and cyan fluorescent protein.

Authors:  M Tramier; K Kemnitz; C Durieux; M Coppey-Moisan
Journal:  J Microsc       Date:  2004-02       Impact factor: 1.758

Review 7.  Dynamics of nuclear receptor movement and transcription.

Authors:  Gordon L Hager; Akhilesh K Nagaich; Thomas A Johnson; Dawn A Walker; Sam John
Journal:  Biochim Biophys Acta       Date:  2004-03-15

8.  Molecular chaperones function as steroid receptor nuclear mobility factors.

Authors:  Cem Elbi; Dawn A Walker; Guillermo Romero; William P Sullivan; David O Toft; Gordon L Hager; Donald B DeFranco
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-20       Impact factor: 11.205

9.  Imaging analysis of subcellular correlation of androgen receptor and estrogen receptor alpha in single living cells using green fluorescent protein color variants.

Authors:  Ikuo Ochiai; Ken-Ichi Matsuda; Mayumi Nishi; Hitoshi Ozawa; Mitsuhiro Kawata
Journal:  Mol Endocrinol       Date:  2003-10-16

10.  From silencing to gene expression: real-time analysis in single cells.

Authors:  Susan M Janicki; Toshiro Tsukamoto; Simone E Salghetti; William P Tansey; Ravi Sachidanandam; Kannanganattu V Prasanth; Thomas Ried; Yaron Shav-Tal; Edouard Bertrand; Robert H Singer; David L Spector
Journal:  Cell       Date:  2004-03-05       Impact factor: 41.582

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  25 in total

Review 1.  Diversity in genetic in vivo methods for protein-protein interaction studies: from the yeast two-hybrid system to the mammalian split-luciferase system.

Authors:  Bram Stynen; Hélène Tournu; Jan Tavernier; Patrick Van Dijck
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

2.  KCNC3(R420H), a K(+) channel mutation causative in spinocerebellar ataxia 13 displays aberrant intracellular trafficking.

Authors:  Carolina Gallego-Iradi; Justin S Bickford; Swati Khare; Alexis Hall; Jerelyn A Nick; Donya Salmasinia; Kolja Wawrowsky; Serguei Bannykh; Duong P Huynh; Diego E Rincon-Limas; Stefan M Pulst; Harry S Nick; Pedro Fernandez-Funez; Michael F Waters
Journal:  Neurobiol Dis       Date:  2014-08-22       Impact factor: 5.996

3.  Monitoring dynamic protein interactions with photoquenching FRET.

Authors:  Ignacio A Demarco; Ammasi Periasamy; Cynthia F Booker; Richard N Day
Journal:  Nat Methods       Date:  2006-07       Impact factor: 28.547

4.  Characterization of spectral FRET imaging microscopy for monitoring nuclear protein interactions.

Authors:  Ye Chen; Joshua P Mauldin; Richard N Day; Ammasi Periasamy
Journal:  J Microsc       Date:  2007-11       Impact factor: 1.758

5.  Synergistic function of DNA methyltransferases Dnmt3a and Dnmt3b in the methylation of Oct4 and Nanog.

Authors:  Jing-Yu Li; Min-Tie Pu; Ryutaro Hirasawa; Bin-Zhong Li; Yan-Nv Huang; Rong Zeng; Nai-He Jing; Taiping Chen; En Li; Hiroyuki Sasaki; Guo-Liang Xu
Journal:  Mol Cell Biol       Date:  2007-10-15       Impact factor: 4.272

6.  Continuous fluorescence microphotolysis and correlation spectroscopy using 4Pi microscopy.

Authors:  Anton Arkhipov; Jana Hüve; Martin Kahms; Reiner Peters; Klaus Schulten
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

Review 7.  FRET-FLIM applications in plant systems.

Authors:  Christoph A Bücherl; Arjen Bader; Adrie H Westphal; Sergey P Laptenok; Jan Willem Borst
Journal:  Protoplasma       Date:  2014-01-04       Impact factor: 3.356

8.  Direct measurement of association and dissociation rates of DNA binding in live cells by fluorescence correlation spectroscopy.

Authors:  Ariel Michelman-Ribeiro; Davide Mazza; Tilman Rosales; Timothy J Stasevich; Hacene Boukari; Vikas Rishi; Charles Vinson; Jay R Knutson; James G McNally
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

9.  4Pi microscopy of the nuclear pore complex.

Authors:  Jana Hüve; Ramona Wesselmann; Martin Kahms; Reiner Peters
Journal:  Biophys J       Date:  2008-03-28       Impact factor: 4.033

10.  Generation of double-labeled reporter cell lines for studying co-dynamics of endogenous proteins in individual human cells.

Authors:  Irina Issaeva; Ariel A Cohen; Eran Eden; Cellina Cohen-Saidon; Tamar Danon; Lydia Cohen; Uri Alon
Journal:  PLoS One       Date:  2010-10-21       Impact factor: 3.240

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