Literature DB >> 15748917

Sampling rate effects on measurements of correlated and biased random walks.

E A Codling1, N A Hill.   

Abstract

When observing the two-dimensional movement of animals or microorganisms, it is usually necessary to impose a fixed sampling rate, so that observations are made at certain fixed intervals of time and the trajectory is split into a set of discrete steps. A sampling rate that is too small will result in information about the original path and correlation being lost. If random walk models are to be used to predict movement patterns or to estimate parameters to be used in continuum models, then it is essential to be able to quantify and understand the effect of the sampling rate imposed by the observer on real trajectories. We use a velocity jump process with a realistic reorientation model to simulate correlated and biased random walks and investigate the effect of sampling rate on the observed angular deviation, apparent speed and mean turning angle. We discuss a method of estimating the values of the reorientation parameters used in the original random walk from the rediscretized data that assumes a linear relation between sampling time step and the parameter values.

Mesh:

Year:  2004        PMID: 15748917     DOI: 10.1016/j.jtbi.2004.11.008

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  17 in total

1.  A framework for understanding the architecture of collective movements using pairwise analyses of animal movement data.

Authors:  Leo Polansky; George Wittemyer
Journal:  J R Soc Interface       Date:  2010-09-08       Impact factor: 4.118

2.  A framework for analyzing the robustness of movement models to variable step discretization.

Authors:  Ulrike E Schlägel; Mark A Lewis
Journal:  J Math Biol       Date:  2016-02-06       Impact factor: 2.259

3.  Calculating spatial statistics for velocity jump processes with experimentally observed reorientation parameters.

Authors:  E A Codling; N A Hill
Journal:  J Math Biol       Date:  2005-05-02       Impact factor: 2.259

4.  Evidence for intermittency and a truncated power law from highly resolved aphid movement data.

Authors:  Alla Mashanova; Tom H Oliver; Vincent A A Jansen
Journal:  J R Soc Interface       Date:  2009-05-27       Impact factor: 4.118

5.  Anomalous diffusion of heterogeneous populations characterized by normal diffusion at the individual level.

Authors:  Simona Hapca; John W Crawford; Iain M Young
Journal:  J R Soc Interface       Date:  2009-01-06       Impact factor: 4.118

6.  The effect of sampling rate on observed statistics in a correlated random walk.

Authors:  G Rosser; A G Fletcher; P K Maini; R E Baker
Journal:  J R Soc Interface       Date:  2013-06-05       Impact factor: 4.118

Review 7.  Random walk models in biology.

Authors:  Edward A Codling; Michael J Plank; Simon Benhamou
Journal:  J R Soc Interface       Date:  2008-08-06       Impact factor: 4.118

8.  Robustness of movement models: can models bridge the gap between temporal scales of data sets and behavioural processes?

Authors:  Ulrike E Schlägel; Mark A Lewis
Journal:  J Math Biol       Date:  2016-04-20       Impact factor: 2.259

9.  Tracking random walks.

Authors:  Riccardo Gallotti; Rémi Louf; Jean-Marc Luck; Marc Barthelemy
Journal:  J R Soc Interface       Date:  2018-02       Impact factor: 4.118

Review 10.  Moving into shape: cell migration during the development and histogenesis of the cerebellum.

Authors:  Karl Schilling
Journal:  Histochem Cell Biol       Date:  2018-05-09       Impact factor: 4.304

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