Literature DB >> 15741335

Deamidation and disulfide bridge formation in human calbindin D28k with effects on calcium binding.

Christophe Vanbelle1, Frédéric Halgand, Tommy Cedervall, Eva Thulin, Karin S Akerfeldt, Olivier Laprévote, Sara Linse.   

Abstract

Calbindin D(28k) (calbindin) is a cytoplasmic protein expressed in the central nervous system, which is implied in Ca(2+) homeostasis and enzyme regulation. A combination of biochemical methods and mass spectrometry has been used to identify post-translational modifications of human calbindin. The protein was studied at 37 degrees C or 50 degrees C in the presence or absence of Ca(2+). One deamidation site was identified at position 203 (Asn) under all conditions. Kinetic experiments show that deamidation of Asn 203 occurs at a rate of 0.023 h(-1) at 50 degrees C for Ca(2+)-free calbindin. Deamidation is slower for the Ca(2+)-saturated protein. The deamidation process leads to two Asp iso-forms, regular Asp and iso-Asp. The form with regular Asp 203 binds four Ca(2+) ions with high affinity and positive cooperativity, i.e., in a very similar manner to non-deamidated protein. The form with beta-aspartic acid (or iso-Asp 203) has reduced affinity for two or three sites leading to sequential Ca(2+) binding, i.e., the Ca(2+)-binding properties are significantly perturbed. The status of the cysteine residues was also assessed. Under nonreducing conditions, cysteines 94 and 100 were found both in reduced and oxidized form, in the latter case in an intramolecular disulfide bond. In contrast, cysteines 187, 219, and 257 were not involved in any disulfide bonds. Both the reduced and oxidized forms of the protein bind four Ca(2+) ions with high affinity in a parallel manner and with positive cooperativity.

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Year:  2005        PMID: 15741335      PMCID: PMC2253450          DOI: 10.1110/ps.041157705

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  41 in total

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  9 in total

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2.  Enhancement of the Ca(2+)-triggering steps of native membrane fusion via thiol-reactivity.

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3.  Zn2+ binding to human calbindin D(28k) and the role of histidine residues.

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4.  Structural characterization of the conformational change in calbindin-D28k upon calcium binding using differential surface modification analyzed by mass spectrometry.

Authors:  Carey A Hobbs; Leesa J Deterding; Lalith Perera; Benjamin G Bobay; Richele J Thompson; Thomas A Darden; John Cavanagh; Kenneth B Tomer
Journal:  Biochemistry       Date:  2009-09-15       Impact factor: 3.162

5.  Role of tissue transglutaminase type 2 in calbindin-D28k interaction with ataxin-1.

Authors:  P J S Vig; J Wei; Q Shao; M D Hebert; S H Subramony; L T Sutton
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Review 6.  Biological chemistry and functionality of protein sulfenic acids and related thiol modifications.

Authors:  Nelmi O Devarie-Baez; Elsa I Silva Lopez; Cristina M Furdui
Journal:  Free Radic Res       Date:  2015-11-11

7.  Crystallization and preliminary crystallographic analysis of human Ca 2+-loaded calbindin-D28k.

Authors:  Chang Zhang; Yuna Sun; Wei Wang; Yan Zhang; Ming Ma; Zhiyong Lou
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-01-31

8.  Three functional facets of calbindin D-28k.

Authors:  Hartmut Schmidt
Journal:  Front Mol Neurosci       Date:  2012-03-15       Impact factor: 5.639

9.  Ionisation bias undermines the use of matrix-assisted laser desorption/ionisation for estimating peptide deamidation: Synthetic peptide studies demonstrate electrospray ionisation gives more reliable response ratios.

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Journal:  Rapid Commun Mass Spectrom       Date:  2019-06-30       Impact factor: 2.419

  9 in total

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