Literature DB >> 15718140

Processing the message: structural insights into capping and decapping mRNA.

Meigang Gu1, Christopher D Lima.   

Abstract

The 5' m7GpppN cap plays an essential role in the life cycle of eukaryotic mRNA and is required for efficient pre-mRNA splicing, export, stability and translation. Nascent pre-mRNA is capped through a series of three enzymatic steps that result in a 5' N7-methyl guanosine linked by an inverted 5'-5' triphosphate bridge to the first nucleotide of the transcript. Early structural studies revealed the mechanisms employed in the first two steps of capping, and more recent structural studies have completed the suite of capping activities and shed light on the mechanisms that target the capping apparatus to the phosphorylated C-terminal domain of RNA polymerase II. RNA decay pathways also target the RNA cap structure. After deadenylation of polyadenylated mRNA, enzymes of the 5'-3' decay pathway hydrolyze the mRNA cap to expose the 5' RNA end to 5'-3' exoribonuclease activities. In the 3'-5' decay pathway, exosome-mediated degradation of RNA occurs from the 3' end after deadenylation, ultimately generating a cap structure that is hydrolyzed by enzymes of this pathway. Recent structural studies have illuminated the mechanisms employed for decapping mRNA in both 5'-3' and 3'-5' decay pathways.

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Year:  2005        PMID: 15718140     DOI: 10.1016/j.sbi.2005.01.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  55 in total

1.  Structure of the guanylyltransferase domain of human mRNA capping enzyme.

Authors:  Chun Chu; Kalyan Das; James R Tyminski; Joseph D Bauman; Rongjin Guan; Weihua Qiu; Gaetano T Montelione; Eddy Arnold; Aaron J Shatkin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-02       Impact factor: 11.205

Review 2.  Viral polymerases.

Authors:  Kyung H Choi
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

3.  Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome.

Authors:  Tim R Mercer; Marcel E Dinger; Cameron P Bracken; Gabriel Kolle; Jan M Szubert; Darren J Korbie; Marjan E Askarian-Amiri; Brooke B Gardiner; Gregory J Goodall; Sean M Grimmond; John S Mattick
Journal:  Genome Res       Date:  2010-11-02       Impact factor: 9.043

Review 4.  Enzymology of RNA cap synthesis.

Authors:  Agnidipta Ghosh; Christopher D Lima
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-05-25       Impact factor: 9.957

5.  mRNAs biotinylated within the 5' cap and protected against decapping: new tools to capture RNA-protein complexes.

Authors:  Sylwia Bednarek; Vanesa Madan; Pawel J Sikorski; Ralf Bartenschlager; Joanna Kowalska; Jacek Jemielity
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

6.  Role of the transcription activator Ste12p as a repressor of PRY3 expression.

Authors:  Kellie S Bickel; David R Morris
Journal:  Mol Cell Biol       Date:  2006-08-28       Impact factor: 4.272

7.  Mutant allele of rna14 in fission yeast affects pre-mRNA splicing.

Authors:  Sudhanshu Yadav; Amit Sonkar; Nafees Ahamad; Shakil Ahmed
Journal:  J Genet       Date:  2016-06       Impact factor: 1.166

8.  DcpS scavenger decapping enzyme can modulate pre-mRNA splicing.

Authors:  Vincent Shen; Hudan Liu; Shin-Wu Liu; Xinfu Jiao; Megerditch Kiledjian
Journal:  RNA       Date:  2008-04-21       Impact factor: 4.942

9.  Structural insights to how mammalian capping enzyme reads the CTD code.

Authors:  Agnidipta Ghosh; Stewart Shuman; Christopher D Lima
Journal:  Mol Cell       Date:  2011-06-16       Impact factor: 17.970

10.  Fission yeast Ctf1, a cleavage and polyadenylation factor subunit is required for the maintenance of genomic integrity.

Authors:  Amit Sonkar; Sachin Gaurav; Shakil Ahmed
Journal:  Mol Genet Genomics       Date:  2017-05-31       Impact factor: 3.291

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