Literature DB >> 22297518

Viral polymerases.

Kyung H Choi1.   

Abstract

Viral polymerases play a central role in viral genome replication and transcription. Based on the genome type and the specific needs of particular virus, RNA-dependent RNA polymerase, RNA-dependent DNA polymerase, DNA-dependent RNA polymerase, and DNA-dependent RNA polymerases are found in various viruses. Viral polymerases are generally active as a single protein capable of carrying out multiple functions related to viral genome synthesis. Specifically, viral polymerases use variety of mechanisms to recognize initial binding sites, ensure processive elongation, terminate replication at the end of the genome, and also coordinate the chemical steps of nucleic acid synthesis with other enzymatic activities. This review focuses on different viral genome replication and transcription strategies, and the polymerase interactions with various viral proteins that are necessary to complete genome synthesis.

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Year:  2012        PMID: 22297518      PMCID: PMC4711277          DOI: 10.1007/978-1-4614-0980-9_12

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  92 in total

1.  Architecture of the flaviviral replication complex. Protease, nuclease, and detergents reveal encasement within double-layered membrane compartments.

Authors:  Pradeep Devappa Uchil; Vijaya Satchidanandam
Journal:  J Biol Chem       Date:  2003-04-16       Impact factor: 5.157

2.  Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution.

Authors:  Tahir H Tahirov; Dmitry Temiakov; Michael Anikin; Vsevolod Patlan; William T McAllister; Dmitry G Vassylyev; Shigeyuki Yokoyama
Journal:  Nature       Date:  2002-10-09       Impact factor: 49.962

3.  Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase.

Authors:  Y Whitney Yin; Thomas A Steitz
Journal:  Science       Date:  2002-09-19       Impact factor: 47.728

4.  The phi29 DNA polymerase:protein-primer structure suggests a model for the initiation to elongation transition.

Authors:  Satwik Kamtekar; Andrea J Berman; Jimin Wang; José M Lázaro; Miguel de Vega; Luis Blanco; Margarita Salas; Thomas A Steitz
Journal:  EMBO J       Date:  2006-03-02       Impact factor: 11.598

5.  Force generation in RNA polymerase.

Authors:  H Y Wang; T Elston; A Mogilner; G Oster
Journal:  Biophys J       Date:  1998-03       Impact factor: 4.033

6.  A DNA binding motif coordinating synthesis and degradation in proofreading DNA polymerases.

Authors:  V Truniger; J M Lázaro; M Salas; L Blanco
Journal:  EMBO J       Date:  1996-07-01       Impact factor: 11.598

7.  Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA.

Authors:  A Jacobo-Molina; J Ding; R G Nanni; A D Clark; X Lu; C Tantillo; R L Williams; G Kamer; A L Ferris; P Clark
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-01       Impact factor: 11.205

Review 8.  Vaccinia virus transcription.

Authors:  Steven S Broyles
Journal:  J Gen Virol       Date:  2003-09       Impact factor: 3.891

9.  Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance.

Authors:  H Huang; R Chopra; G L Verdine; S C Harrison
Journal:  Science       Date:  1998-11-27       Impact factor: 47.728

Review 10.  Viral enzymes.

Authors:  Jeroen R Mesters; Jinzhi Tan; Rolf Hilgenfeld
Journal:  Curr Opin Struct Biol       Date:  2006-11-07       Impact factor: 6.809

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  24 in total

1.  Aedes Anphevirus: an Insect-Specific Virus Distributed Worldwide in Aedes aegypti Mosquitoes That Has Complex Interplays with Wolbachia and Dengue Virus Infection in Cells.

Authors:  Rhys Parry; Sassan Asgari
Journal:  J Virol       Date:  2018-08-16       Impact factor: 5.103

2.  Genomic characterization of a nebovirus strain with a novel RdRp genotype in yaks.

Authors:  Siyi Li; Huiqiang Ma; Zhonghua Yu; Hua Yue; Cheng Tang
Journal:  Arch Virol       Date:  2021-01-09       Impact factor: 2.574

3.  A computational approach for predicting off-target toxicity of antiviral ribonucleoside analogues to mitochondrial RNA polymerase.

Authors:  Holly Freedman; Philip Winter; Jack Tuszynski; D Lorne Tyrrell; Michael Houghton
Journal:  J Biol Chem       Date:  2018-05-08       Impact factor: 5.157

Review 4.  The space between notes: emerging roles for translationally silent ribosomes.

Authors:  Patrick R Smith; Sapna C Pandit; Sarah Loerch; Zachary T Campbell
Journal:  Trends Biochem Sci       Date:  2022-03-01       Impact factor: 14.264

Review 5.  DNA viruses and cancer: insights from evolutionary biology.

Authors:  Nitesh Vinodbhai Pandey
Journal:  Virusdisease       Date:  2020-01-21

6.  Allosteric inhibitors of Coxsackie virus A24 RNA polymerase.

Authors:  Catherine H Schein; Diane Rowold; Kyung H Choi
Journal:  Bioorg Med Chem       Date:  2015-12-15       Impact factor: 3.641

7.  Flavivirus enzymes and their inhibitors.

Authors:  Ekaterina Knyazhanskaya; Marc C Morais; Kyung H Choi
Journal:  Enzymes       Date:  2021-09-01

8.  Characterization of host proteins interacting with the lymphocytic choriomeningitis virus L protein.

Authors:  Kseniya Khamina; Alexander Lercher; Michael Caldera; Christopher Schliehe; Bojan Vilagos; Mehmet Sahin; Lindsay Kosack; Anannya Bhattacharya; Peter Májek; Alexey Stukalov; Roberto Sacco; Leo C James; Daniel D Pinschewer; Keiryn L Bennett; Jörg Menche; Andreas Bergthaler
Journal:  PLoS Pathog       Date:  2017-12-20       Impact factor: 6.823

9.  Genome Evolution of Two Genetically Homogeneous Infectious Bursal Disease Virus Strains During Passages in vitro and ex vivo in the Presence of a Mutagenic Nucleoside Analog.

Authors:  Liliana L Cubas-Gaona; Alexandre Flageul; Céline Courtillon; Francois-Xavier Briand; Maud Contrant; Stephanie Bougeard; Pierrick Lucas; Hélène Quenault; Aurélie Leroux; Alassane Keita; Michel Amelot; Béatrice Grasland; Yannick Blanchard; Nicolas Eterradossi; Paul Alun Brown; Sébastien Mathieu Soubies
Journal:  Front Microbiol       Date:  2021-06-11       Impact factor: 5.640

10.  An OTU deubiquitinating enzyme in Eimeria tenella interacts with Eimeria tenella virus RDRP.

Authors:  Pu Wang; Jianhua Li; Pengtao Gong; Weirong Wang; Yongxing Ai; Xichen Zhang
Journal:  Parasit Vectors       Date:  2018-01-31       Impact factor: 3.876

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