Literature DB >> 27350684

Mutant allele of rna14 in fission yeast affects pre-mRNA splicing.

Sudhanshu Yadav1, Amit Sonkar, Nafees Ahamad, Shakil Ahmed.   

Abstract

Spliceosome and 3'-end processing complexes are necessary for the precursor mRNA (pre-mRNA) maturation. Spliceosome complex removes noncoding introns, while 3'-end processing involves in cleavage and addition of poly(A) tails to the nascent transcript. Rna14 protein in budding yeast has been implicated in cleavage and polyadenylation of mRNA in the nucleus but their role in the pre-mRNA splicing has not been studied. Here, we report the isolation of a mutant allele of rna14 in fission yeast, Schizosaccharomyces pombe that exhibits reduction in protein level of Chk1 at the nonpermissive temperature, primarily due to the defects in posttranscriptional processing. Reverse transcriptase-polymerase chain reaction analysis reveals defective splicing of the chk1(+) transcript at the nonpermissive temperature. Apart from chk1(+), the splicing of some other genes were also found to be defective at the nonpermissive temperature suggesting that Rna14 might be involved in pre-mRNA splicing. Subsequently, genetic interaction of Rna14 with prp1 and physical interactions with Prp28 suggest that the Rna14 might be part of a larger protein complex responsible for the pre-mRNA maturation.

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Year:  2016        PMID: 27350684     DOI: 10.1007/s12041-016-0652-z

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  37 in total

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Journal:  Nat Rev Mol Cell Biol       Date:  2004-09       Impact factor: 94.444

3.  Direct interactions between subunits of CPSF and the U2 snRNP contribute to the coupling of pre-mRNA 3' end processing and splicing.

Authors:  Andrea Kyburz; Arno Friedlein; Hanno Langen; Walter Keller
Journal:  Mol Cell       Date:  2006-07-21       Impact factor: 17.970

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Journal:  Trends Biochem Sci       Date:  1998-01       Impact factor: 13.807

5.  Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs.

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Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

6.  An interaction between U2AF 65 and CF I(m) links the splicing and 3' end processing machineries.

Authors:  Stefania Millevoi; Clarisse Loulergue; Sabine Dettwiler; Sarah Zeïneb Karaa; Walter Keller; Michael Antoniou; Stéphan Vagner
Journal:  EMBO J       Date:  2006-10-05       Impact factor: 11.598

Review 7.  Multiple genetic and biochemical interactions of Brr2, Prp8, Prp31, Prp1 and Prp4 kinase suggest a function in the control of the activation of spliceosomes in Schizosaccharomyces pombe.

Authors:  Claudia A Bottner; Henning Schmidt; Sven Vogel; Melanie Michele; Norbert F Käufer
Journal:  Curr Genet       Date:  2005-10-12       Impact factor: 3.886

8.  Fission yeast chk1 protein kinase links the rad checkpoint pathway to cdc2.

Authors:  N Walworth; S Davey; D Beach
Journal:  Nature       Date:  1993-05-27       Impact factor: 49.962

9.  Wat1/pop3, a conserved WD repeat containing protein acts synergistically with checkpoint kinase Chk1 to maintain genome ploidy in fission yeast S. pombe.

Authors:  Sumit Kumar Verma; Rajeev Ranjan; Vikash Kumar; Mohammad Imran Siddiqi; Shakil Ahmed
Journal:  PLoS One       Date:  2014-02-21       Impact factor: 3.240

10.  An unanticipated early function of DEAD-box ATPase Prp28 during commitment to splicing is modulated by U5 snRNP protein Prp8.

Authors:  Argenta M Price; Janina Görnemann; Christine Guthrie; David A Brow
Journal:  RNA       Date:  2013-11-14       Impact factor: 4.942

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