Literature DB >> 15703789

The dynamic properties of an intramolecular transition from DNA duplex to cytosine-thymine motif triplex.

Marco Brucale1, Giampaolo Zuccheri, Bruno Samorì.   

Abstract

We here report that the formation and breakdown of an intramolecular cytosine-thymine (CT) motif DNA triple-helix can be performed repeatedly, quickly and independently of its local concentration without performance reduction over successive cycles; as a consequence, we propose that this set of characteristics makes the DNA duplex-triplex transition an ideal candidate to power simple nanometer-scale devices capable of maintaining effective performance regardless of their local concentration.

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Year:  2005        PMID: 15703789     DOI: 10.1039/b418353n

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  9 in total

Review 1.  Artificial Molecular Machines.

Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

2.  Fast complementation of split fluorescent protein triggered by DNA hybridization.

Authors:  Vadim V Demidov; Nikolay V Dokholyan; Carlos Witte-Hoffmann; Poornima Chalasani; Hung-Wei Yiu; Feng Ding; Yong Yu; Charles R Cantor; Natalia E Broude
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-06       Impact factor: 11.205

3.  Programmable motion of DNA origami mechanisms.

Authors:  Alexander E Marras; Lifeng Zhou; Hai-Jun Su; Carlos E Castro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-05       Impact factor: 11.205

4.  Using ultraviolet absorption spectroscopy to study nanoswitches based on non-canonical DNA structures.

Authors:  Blair McCarte; Owen T Yeung; Alexander J Speakman; Alistair Elfick; Katherine E Dunn
Journal:  Biochem Biophys Rep       Date:  2022-06-04

5.  Conformational control of energy transfer: a mechanism for biocompatible nanocrystal-based sensors.

Authors:  Euan R Kay; Jungmin Lee; Daniel G Nocera; Moungi G Bawendi
Journal:  Angew Chem Int Ed Engl       Date:  2012-12-06       Impact factor: 15.336

6.  Oligonucleotide-Based Systems for Input-Controlled and Non-Covalently Regulated Protein-Binding.

Authors:  Cooper Battle; Xiaozhu Chu; Janarthanan Jayawickramarajah
Journal:  Supramol Chem       Date:  2013-01-01       Impact factor: 1.688

7.  Triplex inducer-directed self-assembly of single-walled carbon nanotubes: a triplex DNA-based approach for controlled manipulation of nanostructures.

Authors:  Chao Zhao; Konggang Qu; Can Xu; Jinsong Ren; Xiaogang Qu
Journal:  Nucleic Acids Res       Date:  2011-01-11       Impact factor: 16.971

Review 8.  Triplex-forming oligonucleotides: a third strand for DNA nanotechnology.

Authors:  Arun Richard Chandrasekaran; David A Rusling
Journal:  Nucleic Acids Res       Date:  2018-02-16       Impact factor: 16.971

9.  A modular DNA signal translator for the controlled release of a protein by an aptamer.

Authors:  Stefan Beyer; Friedrich C Simmel
Journal:  Nucleic Acids Res       Date:  2006-03-17       Impact factor: 16.971

  9 in total

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