Literature DB >> 1570287

Conserved sequence-tagged sites: a phylogenetic approach to genome mapping.

R Mazzarella1, V Montanaro, J Kere, R Reinbold, A Ciccodicola, M D'Urso, D Schlessinger.   

Abstract

Cognate sites in genomes that diverged approximately 100 million years ago can be detected by PCR assays based on primer pairs from unique sequences. The great majority of such syntenically equivalent sequence-tagged sites (STSs) from human DNA can be used to assemble and format corresponding maps for other primates, and some based on gene sequences are shown to be useful for mouse and rat as well. Universal genomic mapping strategies may be possible by using sets of STSs common to many mammalian species.

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Year:  1992        PMID: 1570287      PMCID: PMC525554          DOI: 10.1073/pnas.89.9.3681

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

Review 1.  Altering the genome by homologous recombination.

Authors:  M R Capecchi
Journal:  Science       Date:  1989-06-16       Impact factor: 47.728

Review 2.  Maps of linkage and synteny homologies between mouse and man.

Authors:  J H Nadeau
Journal:  Trends Genet       Date:  1989-03       Impact factor: 11.639

3.  Construction of yeast artificial chromosome libraries with large inserts using fractionation by pulsed-field gel electrophoresis.

Authors:  R Anand; A Villasante; C Tyler-Smith
Journal:  Nucleic Acids Res       Date:  1989-05-11       Impact factor: 16.971

4.  A common language for physical mapping of the human genome.

Authors:  M Olson; L Hood; C Cantor; D Botstein
Journal:  Science       Date:  1989-09-29       Impact factor: 47.728

Review 5.  The William Allan memorial award address: X-chromosome inactivation and the location and expression of X-linked genes.

Authors:  M F Lyon
Journal:  Am J Hum Genet       Date:  1988-01       Impact factor: 11.025

6.  A protocol for DNA fragment extraction from polyacrylamide gels.

Authors:  I Dybczynski; A Plucienniczak
Journal:  Biotechniques       Date:  1988 Nov-Dec       Impact factor: 1.993

7.  Molecular history of gene conversions in the primate fetal gamma-globin genes. Nucleotide sequences from the common gibbon, Hylobates lar.

Authors:  D H Fitch; C Mainone; M Goodman; J L Slightom
Journal:  J Biol Chem       Date:  1990-01-15       Impact factor: 5.157

8.  Evidence for higher rates of nucleotide substitution in rodents than in man.

Authors:  C I Wu; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  The molecular clock may be an episodic clock.

Authors:  J H Gillespie
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

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  4 in total

1.  Genetic variation detected with RAPD markers among upland and lowland rice cultivars (Oryza sativa L.).

Authors:  L X Yu; H T Nguyen
Journal:  Theor Appl Genet       Date:  1994-01       Impact factor: 5.699

2.  PCR-based immortalization and screening of hierarchical pools of cDNAs.

Authors:  M D'Esposito; R Mazzarella; G Pengue; C Jones; M D'Urso; D Schlessinger
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

Review 3.  Comparative genomics and host resistance against infectious diseases.

Authors:  S T Qureshi; E Skamene; D Malo
Journal:  Emerg Infect Dis       Date:  1999 Jan-Feb       Impact factor: 6.883

4.  Design factors that influence PCR amplification success of cross-species primers among 1147 mammalian primer pairs.

Authors:  Donna J E Housley; Zachary A Zalewski; Stephanie E Beckett; Patrick J Venta
Journal:  BMC Genomics       Date:  2006-10-09       Impact factor: 3.969

  4 in total

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