Literature DB >> 15700999

DNA-templated functional group transformations enable sequence-programmed synthesis using small-molecule reagents.

Kaori Sakurai1, Thomas M Snyder, David R Liu.   

Abstract

DNA-templated organic synthesis (DTS) has previously been used primarily to direct coupling reactions between two DNA-linked reactants. In some cases, reactants are difficult or impossible to tether to DNA oligonucleotides. The development of strategies that enable non-DNA linked small-molecule reagents to participate in sequence-programmed synthesis therefore would significantly expand the capabilities of DTS. We developed efficient DNA-templated functional group transformations of template-linked azides into corresponding amines, carboxylic acids, and thiols. The application of these reactions to a single-solution mixture of four template-linked organic azides enabled each azide to be transformed sequence specifically into a sulfonamide, carbamate, urea, or thiourea using small-molecule sulfonyl chloride, chloroformate, isocyanate, or isothiocyanate reagents not tethered to DNA. Only the four desired products were observed, without formation of any of the 12 possible undesired cross-products. Our results represent a new approach to small molecule diversification in a DNA-programmed manner.

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Year:  2005        PMID: 15700999     DOI: 10.1021/ja0432315

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

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Journal:  Mikrochim Acta       Date:  2019-05-10       Impact factor: 5.833

2.  Templated chemistry for sequence-specific fluorogenic detection of duplex DNA.

Authors:  Hao Li; Raphael M Franzini; Christopher Bruner; Eric T Kool
Journal:  Chembiochem       Date:  2010-10-18       Impact factor: 3.164

3.  Templated chemistry for monitoring damage and repair directly in duplex DNA.

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Journal:  Chem Commun (Camb)       Date:  2012-07-10       Impact factor: 6.222

Review 4.  DNA as a versatile chemical component for catalysis, encoding, and stereocontrol.

Authors:  Scott K Silverman
Journal:  Angew Chem Int Ed Engl       Date:  2010-09-24       Impact factor: 15.336

5.  Translation of DNA into a library of 13,000 synthetic small-molecule macrocycles suitable for in vitro selection.

Authors:  Brian N Tse; Thomas M Snyder; Yinghua Shen; David R Liu
Journal:  J Am Chem Soc       Date:  2008-10-29       Impact factor: 15.419

6.  Efficient nucleic acid detection by templated reductive quencher release.

Authors:  Raphael M Franzini; Eric T Kool
Journal:  J Am Chem Soc       Date:  2009-11-11       Impact factor: 15.419

7.  7-Azidomethoxy-coumarins as profluorophores for templated nucleic acid detection.

Authors:  Raphael M Franzini; Eric T Kool
Journal:  Chembiochem       Date:  2008-12-15       Impact factor: 3.164

8.  A biomolecule-compatible visible-light-induced azide reduction from a DNA-encoded reaction-discovery system.

Authors:  Yiyun Chen; Adam S Kamlet; Jonathan B Steinman; David R Liu
Journal:  Nat Chem       Date:  2011-01-09       Impact factor: 24.427

9.  Orthogonal Functionalization of Nanodiamond Particles after Laser Modification and Treatment with Aromatic Amine Derivatives.

Authors:  Justyna Fraczyk; Adam Rosowski; Beata Kolesinska; Anna Koperkiewcz; Anna Sobczyk-Guzenda; Zbigniew J Kaminski; Mariusz Dudek
Journal:  Nanomaterials (Basel)       Date:  2018-11-05       Impact factor: 5.076

  9 in total

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