Literature DB >> 15680515

Crossing the line between activation and repression.

Jun Ma1.   

Abstract

Gene transcription can be activated or repressed. Such seemingly simple decisions reflect the coordinated actions of a wide array of proteins. Activators and co-activators work together to stimulate the assembly and activity of the machinery that transcribes the gene, whereas repressors and co-repressors work to achieve the opposite goal. Recent studies show that many proteins often engage in regulatory activities and interactions that cross the activation-repression divide. This article discusses selected examples to illustrate the dynamic nature of the transcriptional regulation process and highlights the important roles of not only the individual proteins but also their communication system.

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Year:  2005        PMID: 15680515     DOI: 10.1016/j.tig.2004.11.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  25 in total

Review 1.  Transcriptional activators and activation mechanisms.

Authors:  Jun Ma
Journal:  Protein Cell       Date:  2011-12-17       Impact factor: 14.870

Review 2.  Dual-function transcription factors and their entourage: unique and unifying themes governing two pathogenesis-related genes.

Authors:  Patrick Boyle; Charles Després
Journal:  Plant Signal Behav       Date:  2010-06-01

Review 3.  Transcription in four dimensions: nuclear receptor-directed initiation of gene expression.

Authors:  Raphaël Métivier; George Reid; Frank Gannon
Journal:  EMBO Rep       Date:  2006-02       Impact factor: 8.807

4.  Incorporating nucleosomes into thermodynamic models of transcription regulation.

Authors:  Tali Raveh-Sadka; Michal Levo; Eran Segal
Journal:  Genome Res       Date:  2009-05-18       Impact factor: 9.043

5.  The BdGAMYB protein from Brachypodium distachyon interacts with BdDOF24 and regulates transcription of the BdCathB gene upon seed germination.

Authors:  Virginia González-Calle; Raquel Iglesias-Fernández; Pilar Carbonero; Cristina Barrero-Sicilia
Journal:  Planta       Date:  2014-06-24       Impact factor: 4.116

6.  A conserved role for Snail as a potentiator of active transcription.

Authors:  Martina Rembold; Lucia Ciglar; J Omar Yáñez-Cuna; Robert P Zinzen; Charles Girardot; Ankit Jain; Michael A Welte; Alexander Stark; Maria Leptin; Eileen E M Furlong
Journal:  Genes Dev       Date:  2014-01-08       Impact factor: 11.361

7.  Extracellular signal-regulated kinase signaling regulates the opposing roles of JUN family transcription factors at ETS/AP-1 sites and in cell migration.

Authors:  Nagarathinam Selvaraj; Justin A Budka; Mary W Ferris; Joshua P Plotnik; Peter C Hollenhorst
Journal:  Mol Cell Biol       Date:  2014-10-20       Impact factor: 4.272

8.  Monotonicity, frustration, and ordered response: an analysis of the energy landscape of perturbed large-scale biological networks.

Authors:  Giovanni Iacono; Claudio Altafini
Journal:  BMC Syst Biol       Date:  2010-06-10

9.  Dual-functioning transcription factors in the developmental gene network of Drosophila melanogaster.

Authors:  Denis C Bauer; Fabian A Buske; Timothy L Bailey
Journal:  BMC Bioinformatics       Date:  2010-07-02       Impact factor: 3.169

10.  Transcriptional regulation by CHIP/LDB complexes.

Authors:  Revital Bronstein; Liron Levkovitz; Nir Yosef; Michaela Yanku; Eytan Ruppin; Roded Sharan; Heiner Westphal; Brian Oliver; Daniel Segal
Journal:  PLoS Genet       Date:  2010-08-12       Impact factor: 5.917

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