Literature DB >> 15665825

Admixture mapping for hypertension loci with genome-scan markers.

Xiaofeng Zhu1, Amy Luke, Richard S Cooper, Tom Quertermous, Craig Hanis, Tom Mosley, C Charles Gu, Hua Tang, Dabeeru C Rao, Neil Risch, Alan Weder.   

Abstract

Identification of genetic variants that contribute to risk of hypertension is challenging. As a complement to linkage and candidate gene association studies, we carried out admixture mapping using genome-scan microsatellite markers among the African American participants in the US National Heart, Lung, and Blood Institute's Family Blood Pressure Program. This population was assumed to have experienced recent admixture from ancestral groups originating in Africa and Europe. We used a set of unrelated individuals from Nigeria to represent the African ancestral population and used the European Americans in the Family Blood Pressure Program to provide estimates of allele frequencies for the European ancestors. We genotyped a common set of 269 microsatellite markers in the three groups at the same laboratory. The distribution of marker location-specific African ancestry, based on multipoint analysis, was shifted upward in hypertensive cases versus normotensive controls, consistent with linkage to genes conferring susceptibility. This shift was largely due to a small number of loci, including five adjacent markers on chromosome 6q and two on chromosome 21q. These results suggest that chromosome 6q24 and 21q21 may contain genes influencing risk of hypertension in African Americans.

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Year:  2005        PMID: 15665825     DOI: 10.1038/ng1510

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  137 in total

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Journal:  Pharmacogenomics J       Date:  2010-10-05       Impact factor: 3.550

Review 2.  Between candidate genes and whole genomes: time for alternative approaches in blood pressure genetics.

Authors:  Jacob Basson; Jeannette Simino; D C Rao
Journal:  Curr Hypertens Rep       Date:  2012-02       Impact factor: 5.369

3.  Genome-wide association of anthropometric traits in African- and African-derived populations.

Authors:  Sun J Kang; Charleston W K Chiang; Cameron D Palmer; Bamidele O Tayo; Guillaume Lettre; Johannah L Butler; Rachel Hackett; Adebowale A Adeyemo; Candace Guiducci; Ilze Berzins; Thutrang T Nguyen; Tao Feng; Amy Luke; Daniel Shriner; Kristin Ardlie; Charles Rotimi; Rainford Wilks; Terrence Forrester; Colin A McKenzie; Helen N Lyon; Richard S Cooper; Xiaofeng Zhu; Joel N Hirschhorn
Journal:  Hum Mol Genet       Date:  2010-04-16       Impact factor: 6.150

4.  Inferring genetic ancestry: opportunities, challenges, and implications.

Authors:  Charmaine D Royal; John Novembre; Stephanie M Fullerton; David B Goldstein; Jeffrey C Long; Michael J Bamshad; Andrew G Clark
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

5.  Genotype imputation for African Americans using data from HapMap phase II versus 1000 genomes projects.

Authors:  Yun J Sung; C Charles Gu; Hemant K Tiwari; Donna K Arnett; Ulrich Broeckel; Dabeeru C Rao
Journal:  Genet Epidemiol       Date:  2012-05-29       Impact factor: 2.135

6.  Evaluating the role of admixture in cancer therapy via in vitro drug response and multivariate genome-wide associations.

Authors:  John Jack; Tammy M Havener; Howard L McLeod; Alison A Motsinger-Reif; Matthew Foster
Journal:  Pharmacogenomics       Date:  2015-08-28       Impact factor: 2.533

7.  Combined admixture mapping and association analysis identifies a novel blood pressure genetic locus on 5p13: contributions from the CARe consortium.

Authors:  Xiaofeng Zhu; J H Young; Ervin Fox; Brendan J Keating; Nora Franceschini; Sunjung Kang; Bamidele Tayo; Adebowale Adeyemo; Yun V Sun; Yali Li; Alanna Morrison; Christopher Newton-Cheh; Kiang Liu; Santhi K Ganesh; Abdullah Kutlar; Ramachandran S Vasan; Albert Dreisbach; Sharon Wyatt; Joseph Polak; Walter Palmas; Solomon Musani; Herman Taylor; Richard Fabsitz; Raymond R Townsend; Daniel Dries; Joseph Glessner; Charleston W K Chiang; Thomas Mosley; Sharon Kardia; David Curb; Joel N Hirschhorn; Charles Rotimi; Alexander Reiner; Charles Eaton; Jerome I Rotter; Richard S Cooper; Susan Redline; Aravinda Chakravarti; Daniel Levy
Journal:  Hum Mol Genet       Date:  2011-03-21       Impact factor: 6.150

8.  A haplotype map of the human genome.

Authors: 
Journal:  Nature       Date:  2005-10-27       Impact factor: 49.962

9.  Latino populations: a unique opportunity for the study of race, genetics, and social environment in epidemiological research.

Authors:  Esteban González Burchard; Luisa N Borrell; Shweta Choudhry; Mariam Naqvi; Hui-Ju Tsai; Jose R Rodriguez-Santana; Rocio Chapela; Scott D Rogers; Rui Mei; William Rodriguez-Cintron; Jose F Arena; Rick Kittles; Eliseo J Perez-Stable; Elad Ziv; Neil Risch
Journal:  Am J Public Health       Date:  2005-10-27       Impact factor: 9.308

Review 10.  Complex phenotypes and complex genetics: an introduction to genetic studies of complex traits.

Authors:  John W Belmont; Suzanne M Leal
Journal:  Curr Atheroscler Rep       Date:  2005-05       Impact factor: 5.113

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