Literature DB >> 15664899

Kinetic equivalence of the heat and cold structural transitions of lambda6-85.

Wei Y Yang1, Martin Gruebele.   

Abstract

Heat- and cold-denatured proteins are considered separate thermodynamic states because temperature tuning requires the protein to pass through two 'soft' first-order phase transitions. When both pressure and temperature changes are allowed, the heat- and cold-denatured states of proteins can be interconverted without going through the native state. This raises the question of whether these states are distinguished from one another by their folding kinetics. For the Tyr22Trp/Ala37Gly/Ala49Gly mutant of the 80 residue five-helix bundle protein lambda(6-85), we show that viscosity-corrected folding rates do not distinguish the cold- and heat-denatured states. We attribute this to a folding mechanism dominated by hydrophobic collapse. Our 'temperature-symmetric' approach offers an alternative to viscosity tuning with solvent additives in such cases.

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Year:  2005        PMID: 15664899     DOI: 10.1098/rsta.2004.1508

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  7 in total

1.  Atomistic folding simulations of the five-helix bundle protein λ(6−85).

Authors:  Gregory R Bowman; Vincent A Voelz; Vijay S Pande
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

2.  Solvent-tuning the collapse and helix formation time scales of lambda(6-85)*.

Authors:  Charles Dumont; Yoshitaka Matsumura; Seung Joong Kim; Jinsong Li; Elena Kondrashkina; Hiroshi Kihara; Martin Gruebele
Journal:  Protein Sci       Date:  2006-11       Impact factor: 6.725

3.  Reaching the protein folding speed limit with large, sub-microsecond pressure jumps.

Authors:  Charles Dumont; Tryggvi Emilsson; Martin Gruebele
Journal:  Nat Methods       Date:  2009-05-31       Impact factor: 28.547

4.  Direct observation of downhill folding of lambda-repressor in a microfluidic mixer.

Authors:  Stephen J DeCamp; Athi N Naganathan; Steven A Waldauer; Olgica Bakajin; Lisa J Lapidus
Journal:  Biophys J       Date:  2009-09-16       Impact factor: 4.033

5.  A survey of lambda repressor fragments from two-state to downhill folding.

Authors:  Feng Liu; Yi Gui Gao; Martin Gruebele
Journal:  J Mol Biol       Date:  2010-02-06       Impact factor: 5.469

Review 6.  Fast-folding proteins under stress.

Authors:  Kapil Dave; Martin Gruebele
Journal:  Cell Mol Life Sci       Date:  2015-08-01       Impact factor: 9.261

7.  Highly anomalous energetics of protein cold denaturation linked to folding-unfolding kinetics.

Authors:  M Luisa Romero-Romero; Alvaro Inglés-Prieto; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  PLoS One       Date:  2011-07-29       Impact factor: 3.240

  7 in total

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