Literature DB >> 15660293

No evidence of association or interaction between the IL4RA, IL4, and IL13 genes in type 1 diabetes.

Lisa M Maier1, Juliet Chapman, Joanna M M Howson, David G Clayton, Rebecca Pask, David P Strachan, Wendy L McArdle, Rebecca C J Twells, John A Todd.   

Abstract

Attempts to identify susceptibility loci that, on their own, have marginal main effects by use of gene-gene interaction tests have increased in popularity. The results obtained from analyses of epistasis are, however, difficult to interpret. Gene-gene interaction, albeit only marginally significant, has recently been reported for the interleukin-4 and interleukin-13 genes (IL4 and IL13) with the interleukin-4 receptor A gene (IL4RA), contributing to the susceptibility of type 1 diabetes (T1D). We aimed to replicate these findings by genotyping both large family and case-control data sets and by using previously published data. Gene-gene interaction tests were performed using linear regression models in cases only. We did not find any single-locus associations with T1D and did not obtain evidence of gene-gene interaction. Additional support from independent samples will be even more important in the study of gene-gene interactions and other subgroup analyses.

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Year:  2005        PMID: 15660293      PMCID: PMC1196402          DOI: 10.1086/428387

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  23 in total

Review 1.  Epidemiological methods for studying genes and environmental factors in complex diseases.

Authors:  D Clayton; P M McKeigue
Journal:  Lancet       Date:  2001-10-20       Impact factor: 79.321

2.  A perspective on epistasis: limits of models displaying no main effect.

Authors:  Robert Culverhouse; Brian K Suarez; Jennifer Lin; Theodore Reich
Journal:  Am J Hum Genet       Date:  2002-01-08       Impact factor: 11.025

3.  Parameters for reliable results in genetic association studies in common disease.

Authors:  Ingrid Dahlman; Iain A Eaves; Roman Kosoy; V Anne Morrison; Joanne Heward; Stephen C L Gough; Amit Allahabadia; Jayne A Franklyn; Jaakko Tuomilehto; Eva Tuomilehto-Wolf; Francesco Cucca; Cristian Guja; Constantin Ionescu-Tirgoviste; Helen Stevens; Philippa Carr; Sarah Nutland; Patricia McKinney; Julian P Shield; William Wang; Heather J Cordell; Neil Walker; John A Todd; Patrick Concannon
Journal:  Nat Genet       Date:  2002-01-22       Impact factor: 38.330

Review 4.  Genetic associations in large versus small studies: an empirical assessment.

Authors:  John P A Ioannidis; Thomas A Trikalinos; Evangelia E Ntzani; Despina G Contopoulos-Ioannidis
Journal:  Lancet       Date:  2003-02-15       Impact factor: 79.321

5.  Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease.

Authors:  Kirk E Lohmueller; Celeste L Pearce; Malcolm Pike; Eric S Lander; Joel N Hirschhorn
Journal:  Nat Genet       Date:  2003-01-13       Impact factor: 38.330

Review 6.  Epistasis: what it means, what it doesn't mean, and statistical methods to detect it in humans.

Authors:  Heather J Cordell
Journal:  Hum Mol Genet       Date:  2002-10-01       Impact factor: 6.150

Review 7.  Genome-wide association studies: theoretical and practical concerns.

Authors:  William Y S Wang; Bryan J Barratt; David G Clayton; John A Todd
Journal:  Nat Rev Genet       Date:  2005-02       Impact factor: 53.242

8.  Use of unphased multilocus genotype data in indirect association studies.

Authors:  David Clayton; Juliet Chapman; Jason Cooper
Journal:  Genet Epidemiol       Date:  2004-12       Impact factor: 2.135

9.  Association of IL4R haplotypes with type 1 diabetes.

Authors:  Daniel B Mirel; Ana Maria Valdes; Laura C Lazzeroni; Rebecca L Reynolds; Henry A Erlich; Janelle A Noble
Journal:  Diabetes       Date:  2002-11       Impact factor: 9.461

Review 10.  A comprehensive review of genetic association studies.

Authors:  Joel N Hirschhorn; Kirk Lohmueller; Edward Byrne; Kurt Hirschhorn
Journal:  Genet Med       Date:  2002 Mar-Apr       Impact factor: 8.822

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  17 in total

Review 1.  Reliability of statistical associations between genes and disease.

Authors:  Kenneth F Manly
Journal:  Immunogenetics       Date:  2005-09-29       Impact factor: 2.846

2.  IL4 in the 5q31 context: association studies of type 1 diabetes and rheumatoid arthritis in the Spanish population.

Authors:  Concepción Nuñez; Jose Luis Santiago; Jezabel Varadé; Hermenegildo de la Calle; M Angeles Figueredo; Benjamín Fernandez-Gutierrez; Emilio G de la Concha; Elena Urcelay; Alfonso Martínez
Journal:  Immunogenetics       Date:  2007-12-07       Impact factor: 2.846

3.  Association of interleukin 4 VNTR polymorphism and HIV/AIDS in a north Indian seropositive patients.

Authors:  Ranbiden Chandera Sobti; Nega Berhane; Salih Abdul Mahdi; Hitnder Takur; Ajay Wanch
Journal:  Mol Biol Rep       Date:  2011-06-29       Impact factor: 2.316

4.  Exploring joint effects of genes and the clinical efficacy of morphine for cancer pain: OPRM1 and COMT gene.

Authors:  Cielito C Reyes-Gibby; Sanjay Shete; Trude Rakvåg; Samrat V Bhat; Frank Skorpen; Eduardo Bruera; Stein Kaasa; Pål Klepstad
Journal:  Pain       Date:  2006-12-06       Impact factor: 6.961

5.  Biomarkers for type 1 diabetes.

Authors:  Sharad Purohit; Jin-Xiong She
Journal:  Int J Clin Exp Med       Date:  2008-02-29

6.  Association analysis of SNPs in the IL4R locus with type I diabetes.

Authors:  H A Erlich; K Lohman; S J Mack; A M Valdes; C Julier; D Mirel; J A Noble; G E Morahan; S S Rich
Journal:  Genes Immun       Date:  2009-12       Impact factor: 2.676

7.  Lack of association of type 1 diabetes with the IL4R gene.

Authors:  H Q Qu; M C Tessier; R Fréchette; F Bacot; C Polychronakos
Journal:  Diabetologia       Date:  2006-03-15       Impact factor: 10.122

Review 8.  Investigating the molecular basis of major depressive disorder etiology: a functional convergent genetic approach.

Authors:  Mbemba Jabbi; Jaap Korf; Johan Ormel; Ido P Kema; Johan A den Boer
Journal:  Ann N Y Acad Sci       Date:  2008-12       Impact factor: 5.691

Review 9.  Joint genetic susceptibility to type 1 diabetes and autoimmune thyroiditis: from epidemiology to mechanisms.

Authors:  Amanda Huber; Francesca Menconi; Sarah Corathers; Eric M Jacobson; Yaron Tomer
Journal:  Endocr Rev       Date:  2008-09-05       Impact factor: 19.871

10.  A preliminary study of the relation between IL-4 and hypertension in type II diabetes mellitus.

Authors:  Eman Badr; Mohamed Assar; Elsayed I Elshayeb; Safaa Fath El-Bab; Salah El-Kousy
Journal:  Mol Biol Rep       Date:  2018-09-04       Impact factor: 2.316

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