Literature DB >> 1565621

Evolutionarily different alphoid repeat DNA on homologous chromosomes in human and chimpanzee.

A L Jørgensen1, H B Laursen, C Jones, A L Bak.   

Abstract

Centromeric alphoid DNA in primates represents a class of evolving repeat DNA. In humans, chromosomes 13 and 21 share one subfamily of alphoid DNA while chromosomes 14 and 22 share another subfamily. We show that similar pairwise homogenizations occur in the chimpanzee (Pan troglodytes), where chromosomes 14 and 22, homologous to human chromosomes 13 and 21, share one partially homogenized alphoid DNA subfamily and chromosomes 15 and 23, homologous to human chromosomes 14 and 22, share another extensively homogenized subfamily. Such a pattern of homogenization presumably predates speciation 3-10 million years ago. However, the alphoid DNA on these human and chimpanzee chromosomes is not orthologous but originates from two evolutionarily different repeat families. It follows that dramatic sequence evolution has occurred in a concerted fashion among the chromosomes in one or both species during or after separation.

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Year:  1992        PMID: 1565621      PMCID: PMC48856          DOI: 10.1073/pnas.89.8.3310

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Partial deletion of alpha satellite DNA associated with reduced amounts of the centromere protein CENP-B in a mitotically stable human chromosome rearrangement.

Authors:  R Wevrick; W C Earnshaw; P N Howard-Peebles; H F Willard
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

2.  Evolution of repeated DNA sequences by unequal crossover.

Authors:  G P Smith
Journal:  Science       Date:  1976-02-13       Impact factor: 47.728

3.  Long-range organization of tandem arrays of alpha satellite DNA at the centromeres of human chromosomes: high-frequency array-length polymorphism and meiotic stability.

Authors:  R Wevrick; H F Willard
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

4.  Definition of a second dimeric subfamily of human alpha satellite DNA.

Authors:  J D Thompson; J E Sylvester; I L Gonzalez; C C Costanzi; D Gillespie
Journal:  Nucleic Acids Res       Date:  1989-04-11       Impact factor: 16.971

5.  Chromosome-specific subsets of human alpha satellite DNA: analysis of sequence divergence within and between chromosomal subsets and evidence for an ancestral pentameric repeat.

Authors:  H F Willard; J S Waye
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

Review 6.  The genomics of long tandem arrays of satellite DNA in the human genome.

Authors:  H F Willard
Journal:  Genome       Date:  1989       Impact factor: 2.166

7.  Vectorial expansion of the involucrin gene and the relatedness of the hominoids.

Authors:  P Djian; H Green
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

8.  Recent amplification of an alpha satellite DNA in humans.

Authors:  K M Gray; J W White; C Costanzi; D Gillespie; W T Schroeder; B Calabretta; G F Saunders
Journal:  Nucleic Acids Res       Date:  1985-01-25       Impact factor: 16.971

9.  A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite.

Authors:  H Masumoto; H Masukata; Y Muro; N Nozaki; T Okazaki
Journal:  J Cell Biol       Date:  1989-11       Impact factor: 10.539

10.  Promoter variation in the ribosomal RNA genes in Drosophila melanogaster strains.

Authors:  A Mian; G A Dover
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

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  18 in total

1.  Identification and characterization of satellite III subfamilies to the acrocentric chromosomes.

Authors:  R Bandyopadhyay; C McQuillan; S L Page; K H Choo; L G Shaffer
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

2.  Evidence for a fast, intrachromosomal conversion mechanism from mapping of nucleotide variants within a homogeneous alpha-satellite DNA array.

Authors:  Dirk Schindelhauer; Tobias Schwarz
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

3.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

4.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

5.  Large tandem, higher order repeats and regularly dispersed repeat units contribute substantially to divergence between human and chimpanzee Y chromosomes.

Authors:  Vladimir Paar; Matko Glunčić; Ivan Basar; Marija Rosandić; Petar Paar; Mislav Cvitković
Journal:  J Mol Evol       Date:  2010-11-20       Impact factor: 2.395

Review 6.  Epigenetic regulation of heterochromatic DNA stability.

Authors:  Jamy C Peng; Gary H Karpen
Journal:  Curr Opin Genet Dev       Date:  2008-03-26       Impact factor: 5.578

7.  Adaptive evolution of Cid, a centromere-specific histone in Drosophila.

Authors:  H S Malik; S Henikoff
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

8.  Interhomologue sequence variation of alpha satellite DNA from human chromosome 17: evidence for concerted evolution along haplotypic lineages.

Authors:  P E Warburton; H F Willard
Journal:  J Mol Evol       Date:  1995-12       Impact factor: 2.395

9.  Definition of a new alpha satellite suprachromosomal family characterized by monomeric organization.

Authors:  I A Alexandrov; L I Medvedev; T D Mashkova; L L Kisselev; L Y Romanova; Y B Yurov
Journal:  Nucleic Acids Res       Date:  1993-05-11       Impact factor: 16.971

10.  Evolutionary divergence of human chromosome 9 as revealed by the position of the ABL protooncogene in higher primates.

Authors:  R S Verma; S Luke
Journal:  Mol Gen Genet       Date:  1994-05-25
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