Literature DB >> 11330397

Identification and characterization of satellite III subfamilies to the acrocentric chromosomes.

R Bandyopadhyay1, C McQuillan, S L Page, K H Choo, L G Shaffer.   

Abstract

The centromeres and the short arms of the five pairs of acrocentric chromosomes in humans are composed of tandemly ordered repetitive DNA. Previous studies have suggested that the exchanges between acrocentric chromosomes have resulted in concerted evolution of different DNA sequences in their short arms. The acrocentric chromosomes are clinically relevant since they are involved in Robertsonian translocation formation and non-disjunction resulting in aneuploidy. Here we have identified seven new satellite III repetitive DNA subfamilies, determined their nucleotide sequences and established their chromosomal distributions on the short arms of the acrocentric chromosomes. Knowledge of these related sequences may help to elucidate the molecular basis of Robertsonian translocation formation.

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Year:  2001        PMID： 11330397     DOI： 10.1023/a:1016648404388

Source DB:  PubMed          Journal:  Chromosome Res        ISSN： 0967-3849            Impact factor:   5.239


  64 in total

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Authors:  K H Choo; E Earle; B Vissel; P Kalitsis
Journal:  Am J Hum Genet       Date:  1992-04       Impact factor: 11.025

2.  Direct evidence of a role for heterochromatin in meiotic chromosome segregation.

Authors:  A F Dernburg; J W Sedat; R S Hawley
Journal:  Cell       Date:  1996-07-12       Impact factor: 41.582

Review 3.  Alu: structure, origin, evolution, significance and function of one-tenth of human DNA.

Authors:  C W Schmid
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1996

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Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

5.  Long-range analyses of the centromeric regions of human chromosomes 13, 14 and 21: identification of a narrow domain containing two key centromeric DNA elements.

Authors:  H E Trowell; A Nagy; B Vissel; K H Choo
Journal:  Hum Mol Genet       Date:  1993-10       Impact factor: 6.150

6.  Sequences flanking the centromere of human chromosome 10 are a complex patchwork of arm-specific sequences, stable duplications and unstable sequences with homologies to telomeric and other centromeric locations.

Authors:  M S Jackson; M Rocchi; G Thompson; T Hearn; M Crosier; J Guy; D Kirk; L Mulligan; A Ricco; S Piccininni; R Marzella; L Viggiano; N Archidiacono
Journal:  Hum Mol Genet       Date:  1999-02       Impact factor: 6.150

7.  Assignment of the alpha 1-antitrypsin gene and a sequence-related gene to human chromosome 14 by molecular hybridization.

Authors:  E C Lai; F T Kao; M L Law; S L Woo
Journal:  Am J Hum Genet       Date:  1983-05       Impact factor: 11.025

8.  A direct demonstration of somatically paired heterochromatin of human chromosomes.

Authors:  M Schmid; D Grunert; T Haaf; W Engel
Journal:  Cytogenet Cell Genet       Date:  1983

9.  Integration of human alpha-satellite DNA into simian chromosomes: centromere protein binding and disruption of normal chromosome segregation.

Authors:  T Haaf; P E Warburton; H F Willard
Journal:  Cell       Date:  1992-08-21       Impact factor: 41.582

10.  Recent evolution of DNA sequence homology in the pericentromeric regions of human acrocentric chromosomes.

Authors:  D M Kurnit; R L Neve; C C Morton; G A Bruns; N S Ma; D R Cox; H P Klinger
Journal:  Cytogenet Cell Genet       Date:  1984
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  19 in total

1.  Sequence and structure of the extrachromosomal palindrome encoding the ribosomal RNA genes in Dictyostelium.

Authors:  Richard Sucgang; Guokai Chen; Wen Liu; Ryan Lindsay; Jing Lu; Donna Muzny; Gad Shaulsky; William Loomis; Richard Gibbs; Adam Kuspa
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

Review 2.  Parental origin and timing of de novo Robertsonian translocation formation.

Authors:  Ruma Bandyopadhyay; Anita Heller; Cami Knox-DuBois; Christopher McCaskill; Sue Ann Berend; Scott L Page; Lisa G Shaffer
Journal:  Am J Hum Genet       Date:  2002-11-06       Impact factor: 11.025

3.  Obligate short-arm exchange in de novo Robertsonian translocation formation influences placement of crossovers in chromosome 21 nondisjunction.

Authors:  Sue Ann Berend; Scott L Page; William Atkinson; Christopher McCaskill; Neil E Lamb; Stephanie L Sherman; Lisa G Shaffer
Journal:  Am J Hum Genet       Date:  2002-12-23       Impact factor: 11.025

4.  The Evolution of satellite III DNA subfamilies among primates.

Authors:  Malgorzata Jarmuz; Caron D Glotzbach; Kristen A Bailey; Ruma Bandyopadhyay; Lisa G Shaffer
Journal:  Am J Hum Genet       Date:  2007-01-23       Impact factor: 11.025

5.  Gene dosage change of TPTE and BAGE2 and breakpoint analysis in Robertsonian Down syndrome.

Authors:  Sheng-Wen Shaw; Chih-Ping Chen; Po-Jen Cheng; Tzu-Hao Wang; Jia-Woei Hou; Cheng-Tao Lin; Shuenn-Dhy Chang; Hsiao-Lin Hwa; Ju-Li Lin; An-Shine Chao; Yung-Kuei Soong; Fon-Jou Hsieh
Journal:  J Hum Genet       Date:  2007-12-12       Impact factor: 3.172

6.  Centromere Destiny in Dicentric Chromosomes: New Insights from the Evolution of Human Chromosome 2 Ancestral Centromeric Region.

Authors:  Giorgia Chiatante; Giuliana Giannuzzi; Francesco Maria Calabrese; Evan E Eichler; Mario Ventura
Journal:  Mol Biol Evol       Date:  2017-07-01       Impact factor: 16.240

7.  Structural and functional characterization of noncoding repetitive RNAs transcribed in stressed human cells.

Authors:  Rut Valgardsdottir; Ilaria Chiodi; Manuela Giordano; Fabio Cobianchi; Silvano Riva; Giuseppe Biamonti
Journal:  Mol Biol Cell       Date:  2005-03-23       Impact factor: 4.138

8.  Satellite III sequences on 14p and their relevance to Robertsonian translocation formation.

Authors:  R Bandyopadhyay; S A Berend; S L Page; K H Choo; L G Shaffer
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

9.  Implication of LRRC4C and DPP6 in neurodevelopmental disorders.

Authors:  Gilles Maussion; Cristiana Cruceanu; Jill A Rosenfeld; Scott C Bell; Fabrice Jollant; Jin Szatkiewicz; Ryan L Collins; Carrie Hanscom; Ilaria Kolobova; Nicolas Menjot de Champfleur; Ian Blumenthal; Colby Chiang; Vanessa Ota; Christina Hultman; Colm O'Dushlaine; Steve McCarroll; Martin Alda; Sebastien Jacquemont; Zehra Ordulu; Christian R Marshall; Melissa T Carter; Lisa G Shaffer; Pamela Sklar; Santhosh Girirajan; Cynthia C Morton; James F Gusella; Gustavo Turecki; Dimitri J Stavropoulos; Patrick F Sullivan; Stephen W Scherer; Michael E Talkowski; Carl Ernst
Journal:  Am J Med Genet A       Date:  2016-10-19       Impact factor: 2.802

10.  AT-rich repeats associated with chromosome 22q11.2 rearrangement disorders shape human genome architecture on Yq12.

Authors:  Melanie Babcock; Svetlana Yatsenko; Pawel Stankiewicz; James R Lupski; Bernice E Morrow
Journal:  Genome Res       Date:  2007-02-06       Impact factor: 9.043
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