Literature DB >> 15651843

Urea lesion formation in DNA as a consequence of 7,8-dihydro-8-oxoguanine oxidation and hydrolysis provides a potent source of point mutations.

Paul T Henderson1, William L Neeley, James C Delaney, Feng Gu, Jacquine C Niles, Sang Soo Hah, Steven R Tannenbaum, John M Essigmann.   

Abstract

The DNA oxidation product 7,8-dihydro-8-oxoguanine (8-oxoG) forms several mutagenic oxidation products, including a metastable oxaluric acid (Oa) derivative. We report here that a synthetic oligonucleotide containing Oa hydrolyzes under simulated "in vivo" conditions to form a mutagenic urea (Ua) lesion. Using the Oa 2'-deoxyribonucleoside as a model, the hydrolysis rate depended strongly upon the concentrations of bicarbonate and divalent magnesium. In buffered solutions containing physiologically relevant levels of these species, the half-life of Oa nucleoside was approximately 40 h at 37 degrees C. The mutagenic properties of Ua in DNA were investigated using a M13mp7L2 bacteriophage genome containing Ua at a specific site. Transfection of the lesion-containing genome into wild-type AB1157 Escherichia coli allowed determination of the mutation frequency and DNA polymerase bypass efficiency from the resulting progeny phage. Ua was bypassed with an efficiency of 11% as compared to a guanine control and caused a 99% G-->T mutation frequency, assuming the lesion originated from G, which is at least an order of magnitude higher than the mutation frequency of 8-oxoG under the same conditions. SOS induction of bypass DNA polymerase(s) in the bacteria prior to transfection caused the mutation frequency and type to shift to 43% G-->T, 46% G-->C, and 10% G-->A mutations. We suggest that Ua is instructional, meaning that the shape of the lesion and its interactions with DNA polymerases influence which nucleotide is inserted opposite the lesion during replication and that the instructional nature of the lesion is modulated by the size of the binding pocket of the DNA polymerase. Replication past Ua, when formed by hydrolysis of the 8-oxoG oxidation product Oa, denotes a pathway that nearly quantitatively generates point mutations in vivo.

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Year:  2005        PMID: 15651843     DOI: 10.1021/tx049757k

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  15 in total

1.  Sequence-dependent variation in the reactivity of 8-Oxo-7,8-dihydro-2'-deoxyguanosine toward oxidation.

Authors:  Kok Seong Lim; Koli Taghizadeh; John S Wishnok; I Ramesh Babu; Vladimir Shafirovich; Nicholas E Geacintov; Peter C Dedon
Journal:  Chem Res Toxicol       Date:  2011-12-02       Impact factor: 3.739

2.  Measurement of 7,8-dihydro-8-oxo-2'-deoxyguanosine metabolism in MCF-7 cells at low concentrations using accelerator mass spectrometry.

Authors:  Sang Soo Hah; Janna M Mundt; Hyung M Kim; Rhoda A Sumbad; Kenneth W Turteltaub; Paul T Henderson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-25       Impact factor: 11.205

Review 3.  Biological properties of single chemical-DNA adducts: a twenty year perspective.

Authors:  James C Delaney; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2007-12-12       Impact factor: 3.739

Review 4.  Mechanisms of MTH1 inhibition-induced DNA strand breaks: The slippery slope from the oxidized nucleotide pool to genotoxic damage.

Authors:  Priyamvada Rai; Robert W Sobol
Journal:  DNA Repair (Amst)       Date:  2019-03-02

Review 5.  Urea-aromatic interactions in biology.

Authors:  Shampa Raghunathan; Tanashree Jaganade; U Deva Priyakumar
Journal:  Biophys Rev       Date:  2020-02-17

6.  The mouse ortholog of NEIL3 is a functional DNA glycosylase in vitro and in vivo.

Authors:  Minmin Liu; Viswanath Bandaru; Jeffrey P Bond; Pawel Jaruga; Xiaobei Zhao; Plamen P Christov; Cynthia J Burrows; Carmelo J Rizzo; Miral Dizdaroglu; Susan S Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-25       Impact factor: 11.205

Review 7.  Chemical and biological consequences of oxidatively damaged guanine in DNA.

Authors:  Sarah Delaney; Daniel A Jarem; Catherine B Volle; Craig J Yennie
Journal:  Free Radic Res       Date:  2012-02-22

8.  Flexible 5-guanidino-4-nitroimidazole DNA lesions: structures and thermodynamics.

Authors:  Lei Jia; Vladimir Shafirovich; Robert Shapiro; Nicholas E Geacintov; Suse Broyde
Journal:  Biochemistry       Date:  2006-05-30       Impact factor: 3.162

9.  Structural context effects in the oxidation of 8-oxo-7,8-dihydro-2'-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing.

Authors:  Aaron M Fleming; James G Muller; Adrienne C Dlouhy; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2012-08-29       Impact factor: 15.419

10.  Chemical-biological fingerprinting: probing the properties of DNA lesions formed by peroxynitrite.

Authors:  Sarah Delaney; James C Delaney; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2007-10-18       Impact factor: 3.739

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